Evidence map›Paper›PMID 35637493›Full record

ArticleHereditas2022

Trimeric complexes of Antp-TBP with TFIIEβ or Exd modulate transcriptional activity.

Gustavo Jiménez-Mejía, Rubén Montalvo-Méndez, Carolina Hernández-Bautista, Claudia Altamirano-Torres, Martha Vázquez, Mario Zurita, Diana Reséndez-Pérez

Open access · goldAbstract read
In one paragraph

Article in Hereditas, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
0.4field-weighted citation impact, top 42% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed, 5 citations in OpenAlex.

  1. Article
  2. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 2 institutions in 1 country.

Gustavo Jiménez-Mejía *Universidad Autónoma de Nuevo León, Facultad de Ciencias Biológicas, Departamento de Inmunología y Virología, San Nicolás de los Garza, Nuevo León, México.
Rubén Montalvo-Méndez *Universidad Autónoma de Nuevo León, Facultad de Ciencias Biológicas, Departamento de Inmunología y Virología, San Nicolás de los Garza, Nuevo León, México.
Carolina Hernández-BautistaUniversidad Autónoma de Nuevo León, Facultad de Ciencias Biológicas, Departamento de Inmunología y Virología, San Nicolás de los Garza, Nuevo León, México.
Claudia Altamirano-TorresUniversidad Autónoma de Nuevo León, Facultad de Ciencias Biológicas, Departamento de Inmunología y Virología, San Nicolás de los Garza, Nuevo León, México.
Martha VázquezUniversidad Nacional Autónoma de México, Instituto de Biotecnología, Departamento de Fisiología Molecular y Genética del Desarrollo, Cuernavaca, Morelos, México.
Mario ZuritaUniversidad Nacional Autónoma de México, Instituto de Biotecnología, Departamento de Fisiología Molecular y Genética del Desarrollo, Cuernavaca, Morelos, México.
Diana Reséndez-PérezUniversidad Autónoma de Nuevo León, Facultad de Ciencias Biológicas, Departamento de Inmunología y Virología, San Nicolás de los Garza, Nuevo León, México. diana.resendezpr@uanl.edu.mx.
Universidad Autónoma de Nuevo León · MXUniversidad Nacional Autónoma de México · MX

Funding

Consejo Nacional de Ciencia y Tecnología 2280Consejo Nacional de Ciencia y Tecnología 722363Consejo Nacional de Ciencia y Tecnología 790953
6 · The paper itself

Abstract

backgroundHox proteins finely coordinate antero-posterior axis during embryonic development and through their action specific target genes are expressed at the right time and space to determine the embryo body plan. As master transcriptional regulators, Hox proteins recognize DNA through the homeodomain (HD) and interact with a multitude of proteins, including general transcription factors and other cofactors. HD binding specificity increases by protein-protein interactions with a diversity of cofactors that outline the Hox interactome and determine the transcriptional landscape of the selected target genes. All these interactions clearly demonstrate Hox-driven transcriptional regulation, but its precise mechanism remains to be elucidated.

resultsHere we report Antennapedia (Antp) Hox protein-protein interaction with the TATA-binding protein (TBP) and the formation of novel trimeric complexes with TFIIEβ and Extradenticle (Exd), as well as its participation in transcriptional regulation. Using Bimolecular Fluorescence Complementation (BiFC), we detected the interaction of Antp-TBP and, in combination with Förster Resonance Energy Transfer (BiFC-FRET), the formation of the trimeric complex with TFIIEβ and Exd in living cells. Mutational analysis showed that Antp interacts with TBP through their N-terminal polyglutamine-stretches. The trimeric complexes of Antp-TBP with TFIIEβ and Exd were validated using different Antp mutations to disrupt the trimeric complexes. Interestingly, the trimeric complex Antp-TBP-TFIIEβ significantly increased the transcriptional activity of Antp, whereas Exd diminished its transactivation.

conclusionsOur findings provide important insights into the Antp interactome with the direct interaction of Antp with TBP and the two new trimeric complexes with TFIIEβ and Exd. These novel interactions open the possibility to analyze promoter function and gene expression to measure transcription factor binding dynamics at target sites throughout the genome.

Indexed as

Antennapedia Homeodomain ProteinDrosophila ProteinsHomeodomain ProteinsTATA-Box Binding ProteinTranscription FactorsTranscription Factors, TFIIGene Expression Regulation, DevelopmentalHEK293 CellsHumansAntennapedia Homeodomain ProteinAntp protein, DrosophilaDrosophila Proteinsexd protein, DrosophilaHomeodomain ProteinsTATA-Box Binding ProteinTranscription FactorsTranscription Factors, TFIItranscription factor TFIIEAntpBiFC-FRETExdTBPTFIIEβTrimeric complexes

Identifiers

PMID35637493
PMCPMC9150345
OpenAlexW4281733092

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.