Evidence map›Paper›PMID 35637422›Full record

ArticleNature structural & molecular biology2022

Structural insights into binding of therapeutic channel blockers in NMDA receptors.

Tsung-Han Chou, Max Epstein, Kevin Michalski, Eve Fine, Philip C Biggin, Hiro Furukawa

Open access · greenAbstract read
In one paragraph

Article in Nature structural & molecular biology, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 47 papers.

0numbers the graph read from it
0cells of the map it votes in
47citing papers in PubMed
13.3field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

47 citing papers in PubMed, 70 citations in OpenAlex.

  1. Structural basis of opioid receptor activation by PCP and ketamine.Nature structural & molecular biology · 2026
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  14. Pharmaceuticals (Basel, Switzerland) · 2025
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 2 institutions in 2 countries.

Tsung-Han Chou *W.M. Keck Structural Biology Laboratory, Cold Spring Harbor Laboratory, Cold Spring Harbor, New York, NY, USA.ORCID 0000-0001-6154-6283
Max Epstein *W.M. Keck Structural Biology Laboratory, Cold Spring Harbor Laboratory, Cold Spring Harbor, New York, NY, USA.
Kevin Michalski *W.M. Keck Structural Biology Laboratory, Cold Spring Harbor Laboratory, Cold Spring Harbor, New York, NY, USA.
Eve FineW.M. Keck Structural Biology Laboratory, Cold Spring Harbor Laboratory, Cold Spring Harbor, New York, NY, USA.
Philip C BigginDepartment of Biochemistry, University of Oxford, Oxford, UK.ORCID 0000-0001-5100-8836
Hiro FurukawaW.M. Keck Structural Biology Laboratory, Cold Spring Harbor Laboratory, Cold Spring Harbor, New York, NY, USA. furukawa@cshl.edu.ORCID 0000-0001-8296-8426
Cold Spring Harbor Laboratory · USUniversity of Oxford · GB

Funding

Structures and reagents of NMDA receptorsR01MH085926 · NIMH · COLD SPRING HARBOR LABORATORY · PI Hiroyasu Furukawa · 2010 to 2026
$8.9M
Structure and Function of Hetero-Multimeric Ligand-Gated Ion ChannelsR01NS111745 · NINDS · COLD SPRING HARBOR LABORATORY · PI Hiroyasu Furukawa · 2019 to 2026
$4.2M
Graphical Processing Units and a Large-Memory Compute Node for Applications in Genomics, Neuroscience, and Structural BiologyS10OD028632 · OD · COLD SPRING HARBOR LABORATORY · PI SIEPEL, ADAM CHARLES · 2020 to 2020
$437k
Structural characterization and targeting of tri-heteromeric NMDA receptors involved in neuroplasticityF32MH121061 · NIMH · COLD SPRING HARBOR LABORATORY · PI MICHALSKI, KEVIN · 2020 to 2022
$201k
Biotechnology and Biological Sciences Research Council BB/M006395/1NIH HHS S10 OD028632NIMH NIH HHS F32 MH121061NIMH NIH HHS R01 MH085926NINDS NIH HHS R01 NS111745
6 · The paper itself

Abstract

Excitatory signaling mediated by N-methyl-D-aspartate receptor (NMDAR) is critical for brain development and function, as well as for neurological diseases and disorders. Channel blockers of NMDARs are of medical interest owing to their potential for treating depression, Alzheimer's disease, and epilepsy. However, precise mechanisms underlying binding and channel blockade have remained limited owing to challenges in obtaining high-resolution structures at the binding site within the transmembrane domains. Here, we monitor the binding of three clinically important channel blockers: phencyclidine, ketamine, and memantine in GluN1-2B NMDARs at local resolutions of 2.5-3.5 Å around the binding site using single-particle electron cryo-microscopy, molecular dynamics simulations, and electrophysiology. The channel blockers form different extents of interactions with the pore-lining residues, which control mostly off-speeds but not on-speeds. Our comparative analyses of the three unique NMDAR channel blockers provide a blueprint for developing therapeutic compounds with minimal side effects.

Indexed as

KetamineReceptors, N-Methyl-D-AspartateBinding SitesMemantineMolecular Dynamics SimulationKetamineMemantineReceptors, N-Methyl-D-Aspartate

Identifiers

PMID35637422
PMCPMC10075384
OpenAlexW4281743949

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.