Evidence map›Paper›PMID 35633408›Full record

ArticleBiodegradation2022

Concerted action of extracellular and cytoplasmic esterase and urethane-cleaving activities during Impranil biodegradation by Alicycliphilus denitrificans BQ1.

Jacqueline Fuentes-Jaime, Martín Vargas-Suárez, M Javier Cruz-Gómez, Herminia Loza-Tavera

Abstract read
PubMed Publisher
In one paragraph

Article in Biodegradation, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 13 papers.

0numbers the graph read from it
0cells of the map it votes in
13citing papers in PubMed
1.7field-weighted citation impact, top 18% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

13 citing papers in PubMed, 24 citations in OpenAlex.

  1. Article
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  9. PUR-GEN: A web server for automated generation of polyurethane fragment libraries.Computational and structural biotechnology journal · 2025
    Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 1 institution in 1 country.

Jacqueline Fuentes-JaimeDepartamento de Bioquímica, Facultad de Química, Universidad Nacional Autónoma de México, Ave. Universidad 3000. Col. UNAM, 04510, Ciudad de México, México.ORCID 0000-0002-3042-4264
Martín Vargas-SuárezDepartamento de Bioquímica, Facultad de Química, Universidad Nacional Autónoma de México, Ave. Universidad 3000. Col. UNAM, 04510, Ciudad de México, México.ORCID 0000-0002-7628-7859
M Javier Cruz-GómezDepartamento de Ingeniería Química, Facultad de Química, Universidad Nacional Autónoma de México, Ave. Universidad 3000. Col. UNAM, 04510, Ciudad de México, México.ORCID 0000-0002-6559-0844
Herminia Loza-TaveraDepartamento de Bioquímica, Facultad de Química, Universidad Nacional Autónoma de México, Ave. Universidad 3000. Col. UNAM, 04510, Ciudad de México, México. hlozat@unam.mx.ORCID 0000-0002-7473-7537
Universidad Nacional Autónoma de México · MX

Funding

Consejo Nacional de Ciencia y Tecnología 101737Dirección General de Asuntos del Personal Académico, Universidad Nacional Autónoma de México IN223317Dirección General de Asuntos del Personal Académico, Universidad Nacional Autónoma de México IN227620Programa de Apoyo a la Investigación y el Posgrado, Facultad de Química, Universidad Nacional Autónoma de México 5000-9117
6 · The paper itself

Abstract

The concerted action of commercial esterases, proteases and amidases has been demonstrated to be relevant in polyurethane (PU) degradation by in vitro experiments. However, the spatial and temporal dynamics of these activities during PU biodegradation by PU-degrading bacteria have not been addressed. Here, we examined the capability of Alicycliphilus denitrificans BQ1 to biodegrade the polyester (PS)-PU Impranil, analyzed the temporal and spatial coordination between the extracellular and cytoplasmic esterase and urethane-cleaving activities, and their independent and combined effects on Impranil biodegradation. A. denitrificans BQ1 grew in Impranil, and its clearing was correlated with the cleavage of ester and urethane groups since early times, with decrements of some Impranil compounds and the appearance of biodegradation products. While extracellular esterase was active at early times with its maximum at 18 h, urethanase appeared at this time and increased up to the end of the analysis (48 h), with the cytoplasmic activities behaving similarly but with lower levels than the extracellular ones. Both enzymatic activities exhibited distinct substrate specificity depending on their cellular localization and cultivation times, suggesting they cleave differentially located groups. As the urethane cleavage occurred since early times, when no urethane-cleaving activity was detected, different proteins should be acting at early and late times. In vitro experiments with independent or combined cellular protein fractions supported the previous deduction and confirmed the concerted action of extracellular and cytoplasmic esterase and urethane-cleaving activities. A two-stage process for Impranil degradation by A. denitrificans BQ1 is proposed.

Indexed as

ComamonadaceaeEsterasesBiodegradation, EnvironmentalEstersPolyurethanesEsterasesEstersPolyurethanesAlicycliphilusBiodegradationConcerted enzymatic activitiesEsterasePolyester-polyurethaneUrethane-cleaving activity

Identifiers

PMID35633408
OpenAlexW4281803140

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.