Evidence map›Paper›PMID 35632812›Full record

ArticleViruses2022

Inflammatory Gene Expression Associates with Hepatitis B Virus cccDNA- but Not Integrant-Derived Transcripts in HBeAg Negative Disease.

Andrea Magri, James M Harris, Valentina D'Arienzo, Rosalba Minisini, Frank Jühling, Peter A C Wing, Rachele Rapetti, Monica Leutner, Barbara Testoni, Thomas F Baumert and 4 more

Open access · goldAbstract read
In one paragraph

Article in Viruses, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 11 papers.

0numbers the graph read from it
0cells of the map it votes in
11citing papers in PubMed
2.5field-weighted citation impact, top 10% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

11 citing papers in PubMed, 16 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Functional Cure for Hepatitis B Virus: Challenges and Achievements.International journal of molecular sciences · 2025
    Review
  5. Review
  6. Article
  7. Article
  8. Review
  9. Article
  10. Article
  11. Relevance of HBx for Hepatitis B Virus-Associated Pathogenesis.International journal of molecular sciences · 2023
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

14 authors at 4 institutions in 4 countries.

Andrea MagriNuffield Department of Medicine, University of Oxford, Oxford OX3 7FZ, UK.
James M HarrisNuffield Department of Medicine, University of Oxford, Oxford OX3 7FZ, UK.ORCID 0000-0003-1880-3496
Valentina D'ArienzoNuffield Department of Medicine, University of Oxford, Oxford OX3 7FZ, UK.
Rosalba MinisiniDepartment of Translational Medicine, Università del Piemonte Orientale, 28100 Novara, Italy.ORCID 0000-0002-7548-9731
Frank JühlingInstitut de Recherche sur les Maladies Virales et Hépatiques, University of Strasbourg and Inserm, UMR_S1110, F-67000 Strasbourg, France.
Peter A C WingNuffield Department of Medicine, University of Oxford, Oxford OX3 7FZ, UK.
Rachele RapettiDepartment of Translational Medicine, Università del Piemonte Orientale, 28100 Novara, Italy.ORCID 0000-0002-8136-2622
Monica LeutnerDepartment of Diagnostic Services and Supportive Therapies, ASL Verbano-Cusio-Ossola, 28887 Omegna, Italy.
Barbara TestoniCancer Research Center of Lyon, UMR INSERM 1052, 69008 Lyon, France.
Thomas F BaumertInstitut de Recherche sur les Maladies Virales et Hépatiques, University of Strasbourg and Inserm, UMR_S1110, F-67000 Strasbourg, France.ORCID 0000-0002-8864-2168
Fabien ZoulimCancer Research Center of Lyon, UMR INSERM 1052, 69008 Lyon, France.ORCID 0000-0002-2245-0083
Peter BalfeNuffield Department of Medicine, University of Oxford, Oxford OX3 7FZ, UK.ORCID 0000-0002-6246-0876
Mario PirisiDepartment of Translational Medicine, Università del Piemonte Orientale, 28100 Novara, Italy.ORCID 0000-0001-9740-0155
Jane A McKeatingNuffield Department of Medicine, University of Oxford, Oxford OX3 7FZ, UK.ORCID 0000-0002-7229-5886
Inserm · FRUniversity of Oxford · GBUniversità degli Studi del Piemonte Orientale “Amedeo Avogadro” · ITChinese Academy of Medical Sciences & Peking Union Medical College · CN

Funding

Medical Research Council MR/R022011/1Wellcome Trust 200838/Z/16/Z
6 · The paper itself

Abstract

Chronic hepatitis B virus (HBV) infection is a global health problem that presents as a spectrum of liver disease, reflecting an interplay between the virus and the host immune system. HBV genomes exist as episomal covalently closed circular DNA (cccDNA) or chromosomal integrants. The relative contribution of these genomes to the viral transcriptome in chronic hepatitis B (CHB) is not well-understood. We developed a qPCR method to estimate the abundance of HBV cccDNA- and integrant-derived viral transcripts and applied this to a cohort of patients diagnosed with CHB in the HBe antigen negative phase of disease. We noted a variable pattern of HBV transcripts from both DNA templates, with preS1/S2 mRNAs predominating and a significant association between increasing age and the expression of integrant-derived mRNAs, but not with inflammatory status. In contrast, cccDNA-derived transcripts were associated with markers of liver inflammation. Analysis of the inflammatory hepatic transcriptome identified 24 genes significantly associated with cccDNA transcriptional activity. Our study uncovers an immune gene signature that associates with HBV cccDNA transcription and increases our understanding of viral persistence.

Indexed as

DNA, CircularHepatitis B, ChronicDNA, ViralGene ExpressionHepatitis B e AntigensHepatitis B virusHumansDNA, CircularDNA, ViralHepatitis B e AntigenscccDNAhepatitis B virusinflammationtranscription

Identifiers

PMID35632812
PMCPMC9146050
OpenAlexW4280649833

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.