Evidence map›Paper›PMID 35632712›Full record

ArticleViruses2022

Flavivirus Capsid Proteins Inhibit the Interferon Response.

Adriana M Airo, Alberto Felix-Lopez, Valeria Mancinelli, Danyel Evseev, Joaquin Lopez-Orozco, Kathy Shire, Patrick Paszkowski, Lori Frappier, Katharine E Magor, Tom C Hobman

Open access · goldAbstract read
In one paragraph

Article in Viruses, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 16 papers.

0numbers the graph read from it
0cells of the map it votes in
16citing papers in PubMed
2.8field-weighted citation impact, top 10% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

16 citing papers in PubMed, 21 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Article
  5. Review
  6. New Advances in Small Molecules Targeted at Viral Capsid-Genome Binding.International journal of molecular sciences · 2025
    Review
  7. Review
  8. Article
  9. Article
  10. Review
  11. Article
  12. Review
  13. Article
  14. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 2 institutions in 1 country.

Adriana M AiroDepartment of Medical Microbiology & Immunology, University of Alberta, Edmonton, AB T6G 2E1, Canada.
Alberto Felix-LopezDepartment of Medical Microbiology & Immunology, University of Alberta, Edmonton, AB T6G 2E1, Canada.
Valeria MancinelliDepartment of Cell Biology, University of Alberta, Edmonton, AB T6G 2H7, Canada.
Danyel EvseevDepartment of Biological Sciences, University of Alberta, Edmonton, AB T6G 2E9, Canada.ORCID 0000-0002-0371-4987
Joaquin Lopez-OrozcoHigh Content Analysis Core, University of Alberta, Edmonton, AB T6G 2E1, Canada.ORCID 0000-0003-0454-9757
Kathy ShireDepartment of Molecular Genetics, University of Toronto, Toronto, ON M5G 1M1, Canada.
Patrick PaszkowskiDepartment of Medical Microbiology & Immunology, University of Alberta, Edmonton, AB T6G 2E1, Canada.
Lori FrappierDepartment of Molecular Genetics, University of Toronto, Toronto, ON M5G 1M1, Canada.
Katharine E MagorDepartment of Biological Sciences, University of Alberta, Edmonton, AB T6G 2E9, Canada.ORCID 0000-0002-9331-1486
Tom C HobmanDepartment of Medical Microbiology & Immunology, University of Alberta, Edmonton, AB T6G 2E1, Canada.
University of Alberta · CAUniversity of Toronto · CA

Funding

CIHR PJT-148699 and ZV1-149782CIHR PJT-159442
6 · The paper itself

Abstract

Zika virus (ZIKV) establishes persistent infections in multiple human tissues, a phenomenon that likely plays a role in its ability to cause congenital birth defects and neurological disease. Multiple nonstructural proteins encoded by ZIKV, in particular NS5, are known to suppress the interferon (IFN) response by attacking different steps in this critical antiviral pathway. Less well known are the potential roles of structural proteins in affecting the host immune response during ZIKV infection. Capsid proteins of flaviviruses are of particular interest because a pool of these viral proteins is targeted to the nuclei during infection and, as such, they have the potential to affect host cell gene expression. In this study, RNA-seq analyses revealed that capsid proteins from six different flaviviruses suppress expression of type I IFN and IFN-stimulated genes. Subsequent interactome and in vitro ubiquitination assays showed that ZIKV capsid protein binds to and prevents activating ubiquitination of RIG-I CARD domains by TRIM25, a host factor that is important for the induction arm of the IFN response. The other flavivirus capsid proteins also interacted with TRIM25, suggesting that these viral proteins may attenuate antiviral signaling pathways at very early stages of infection, potentially even before nonstructural proteins are produced.

Indexed as

Capsid ProteinsInterferonsZika Virus InfectionHumansViral Nonstructural ProteinsZika VirusCapsid ProteinsInterferonsViral Nonstructural Proteinscapsid proteinflavivirusesglobal transcriptioninterferon responseTRIM25Zika virus

Identifiers

PMID35632712
PMCPMC9146811
OpenAlexW4229044055

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.