Evidence map›Paper›PMID 35632684›Full record

ArticleViruses2022

Genomic and In Vitro Phenotypic Comparisons of Epidemic and Non-Epidemic Getah Virus Strains.

Noor-Adila Mohamed-Romai-Noor, Sing-Sin Sam, Boon-Teong Teoh, Zur-Raiha Hamim, Sazaly AbuBakar

Open access · goldAbstract read
In one paragraph

Article in Viruses, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 7 papers.

0numbers the graph read from it
0cells of the map it votes in
7citing papers in PubMed
1.8field-weighted citation impact, top 16% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

7 citing papers in PubMed, 9 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 1 institution in 1 country.

Noor-Adila Mohamed-Romai-NoorTropical Infectious Diseases Research and Education Centre, Universiti Malaya, Kuala Lumpur 50603, Malaysia.
Sing-Sin SamTropical Infectious Diseases Research and Education Centre, Universiti Malaya, Kuala Lumpur 50603, Malaysia.ORCID 0000-0003-2527-5310
Boon-Teong TeohTropical Infectious Diseases Research and Education Centre, Universiti Malaya, Kuala Lumpur 50603, Malaysia.
Zur-Raiha HamimTropical Infectious Diseases Research and Education Centre, Universiti Malaya, Kuala Lumpur 50603, Malaysia.
Sazaly AbuBakarTropical Infectious Diseases Research and Education Centre, Universiti Malaya, Kuala Lumpur 50603, Malaysia.ORCID 0000-0002-9267-1420
University of Malaya · MY

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Getah virus is an emerging mosquito-borne animal pathogen. Four phylogenetic groups of GETV, Group I (GI), GII, GIII and GIV, were identified. However, only the GETV GIII was associated with disease epidemics suggesting possible virulence difference in this virus group. Here, we compared the genetic and in vitro phenotypic characteristics between the epidemic and non-epidemic GETV. Our complete coding genome sequence analyses revealed several amino acid substitutions unique to the GETV GIII and GIV groups, which were found mainly in the hypervariable domain of nsP3 and E2 proteins. Replication kinetics of the epidemic (GIII MI-110 and GIII 14-I-605) and non-epidemic GETV strains (prototype GI MM2021 and GIV B254) were compared in mammalian Vero cells and mosquito C6/36 and U4.4 cells. In all cells used, both epidemic GETV GIII MI-110 and GIII 14-I-605 strains showed replication rates and mean maximum titers at least 2.7-fold and 2.3-fold higher than those of GIV B254, respectively (Bonferroni posttest, p < 0.01). In Vero cells, the epidemic GETV strains caused more pronounced cytopathic effects in comparison to the GIV B254. Our findings suggest that higher virus replication competency that produces higher virus titers during infection may be the main determinant of virulence and epidemic potential of GETV.

Indexed as

AlphavirusCulicidaeEpidemicsAnimalsChlorocebus aethiopsGenomicsMammalsPhylogenyVero CellsalphavirusarbovirusemergingGetah virusinfectious diseasestropical

Identifiers

PMID35632684
PMCPMC9145621
OpenAlexW4225416496

What OpenQuestion holds

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LicenceCC BY
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.