Evidence map›Paper›PMID 35632677›Full record

ArticleViruses2022

A Short Series of Case Reports of COVID-19 in Immunocompromised Patients.

Mitali Mishra, Aleena Zahra, Lokendra V Chauhan, Riddhi Thakkar, James Ng, Shreyas Joshi, Eric D Spitzer, Luis A Marcos, W Ian Lipkin, Nischay Mishra

Open access · goldAbstract readCase Reports
In one paragraph

Article in Viruses, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
0.6field-weighted citation impact, top 34% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed, 6 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 2 institutions in 1 country.

Mitali MishraCenter for Infection and Immunity, Mailman School of Public Health, Columbia University, New York, NY 10032, USA.ORCID 0000-0003-1106-7342
Aleena ZahraDivision of Infectious Diseases, Department of Medicine, Stony Brook University, Stony Brook, NY 11794, USA.
Lokendra V ChauhanCenter for Infection and Immunity, Mailman School of Public Health, Columbia University, New York, NY 10032, USA.ORCID 0000-0002-6901-5353
Riddhi ThakkarCenter for Infection and Immunity, Mailman School of Public Health, Columbia University, New York, NY 10032, USA.
James NgCenter for Infection and Immunity, Mailman School of Public Health, Columbia University, New York, NY 10032, USA.
Shreyas JoshiCenter for Infection and Immunity, Mailman School of Public Health, Columbia University, New York, NY 10032, USA.ORCID 0000-0002-0235-4334
Eric D SpitzerDivision of Infectious Diseases, Department of Medicine, Stony Brook University, Stony Brook, NY 11794, USA.ORCID 0000-0002-8794-2441
Luis A MarcosDivision of Infectious Diseases, Department of Medicine, Stony Brook University, Stony Brook, NY 11794, USA.
W Ian LipkinCenter for Infection and Immunity, Mailman School of Public Health, Columbia University, New York, NY 10032, USA.
Nischay MishraCenter for Infection and Immunity, Mailman School of Public Health, Columbia University, New York, NY 10032, USA.ORCID 0000-0002-1177-9641
Columbia University · USStony Brook University · US

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Immunocompromised individuals are at risk of prolonged SARS-CoV-2 infection due to weaker immunity, co-morbidities, and lowered vaccine effectiveness, which may evolve highly mutated variants of SARS-CoV-2. Nonetheless, limited data are available on the immune responses elicited by SARS-CoV-2 infection, reinfections, and vaccinations with emerging variants in immunocompromised patients. We analyzed clinical samples that were opportunistically collected from eight immunocompromised individuals for mutations in SARS-CoV-2 genomes, neutralizing antibody (NAb) titers against different SARS-CoV-2 variants, and the identification of immunoreactive epitopes using a high-throughput coronavirus peptide array. The viral genome analysis revealed two SARS-CoV-2 variants (20A from a deceased patient and an Alpha variant from a recovered patient) with an eight amino-acid (aa) deletion within the N-terminal domain (NTD) of the surface glycoprotein. A higher NAb titer was present against the prototypic USA/WA1/2020 strain in vaccinated immunocompromised patients. NAb titer was absent against the Omicron variant and the cultured virus of the 20A variant with eight aa deletions in non-vaccinated patients. Our data suggest that fatal SARS-CoV-2 infections may occur in immunocompromised individuals even with high titers of NAb post-vaccination. Moreover, persistent SARS-CoV-2 infection may lead to the emergence of newer variants with additional mutations favoring the survival and fitness of the pathogen that include deletions in NAb binding sites in the SARS-CoV-2 surface glycoprotein.

Indexed as

COVID-19Viral VaccinesHumansImmunocompromised HostMembrane GlycoproteinsSARS-CoV-2Membrane GlycoproteinsViral VaccinesCOVID-19immune responseimmunocompromisedinfectionSARS-CoV-2

Identifiers

PMID35632677
PMCPMC9145915
OpenAlexW4225369322

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.