Evidence map›Paper›PMID 35632662›Full record

ArticleViruses2022

Small RNA Sequencing and Multiplex RT-PCR for Diagnostics of Grapevine Viruses and Virus-like Organisms.

Vanja Miljanić, Jernej Jakše, Denis Rusjan, Andreja Škvarč, Nataša Štajner

Abstract read
PubMed Full text at PMC Publisher
In one paragraph

Article in Viruses, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed.

  1. Article
  2. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors.

Vanja MiljanićDepartment of Agronomy, Biotechnical Faculty, University of Ljubljana, 1000 Ljubljana, Slovenia.ORCID 0000-0002-4398-3364
Jernej JakšeDepartment of Agronomy, Biotechnical Faculty, University of Ljubljana, 1000 Ljubljana, Slovenia.ORCID 0000-0002-8907-1627
Denis RusjanDepartment of Agronomy, Biotechnical Faculty, University of Ljubljana, 1000 Ljubljana, Slovenia.
Andreja ŠkvarčChamber of Agriculture and Forestry of Slovenia, Agriculture and Forestry Institute Nova Gorica, 5000 Nova Gorica, Slovenia.
Nataša ŠtajnerDepartment of Agronomy, Biotechnical Faculty, University of Ljubljana, 1000 Ljubljana, Slovenia.ORCID 0000-0002-8572-8695

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Metagenomic approaches used for virus diagnostics allow for rapid and accurate detection of all viral pathogens in the plants. In order to investigate the occurrence of viruses and virus-like organisms infecting grapevine from the Ampelographic collection Kromberk in Slovenia, we used Ion Torrent small RNA sequencing (sRNA-seq) and the VirusDetect pipeline to analyze the sRNA-seq data. The used method revealed the presence of:

Indexed as

RNA, Small UntranslatedViroidsViruses, UnclassifiedVitisDNA VirusesPlant DiseasesReverse Transcriptase Polymerase Chain ReactionRNA, SatelliteSequence Analysis, RNARNA, SatelliteRNA, Small UntranslatedmRT-PCRsRNA-seqviromeVitis vinifera L.

Identifiers

PMID35632662
PMCPMC9145883

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.