Evidence map›Paper›PMID 35632628›Full record

ArticleViruses2022

Isolation of a Human Betaretrovirus from Patients with Primary Biliary Cholangitis.

Mariam Goubran, Weiwei Wang, Stanislav Indik, Alexander Faschinger, Shawn T Wasilenko, Jasper Bintner, Eric J Carpenter, Guangzhi Zhang, Paulo Nuin, Georgina Macintyre and 2 more

Open access · goldAbstract read
In one paragraph

Article in Viruses, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 11 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
11citing papers in PubMed, 1 pooled it
1.7field-weighted citation impact, top 16% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

11 citing papers in PubMed, 1 synthesis or guideline pooled it, 14 citations in OpenAlex.

  1. Pooled it
  2. Review
  3. Article
  4. Article
  5. A new twist on superantigen-activated autoimmune disease.The Journal of clinical investigation · 2025
    Article
  6. The viral origins of breast cancer.Infectious agents and cancer · 2024
    Review
  7. Review
  8. Article
  9. Article
  10. Review
  11. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

12 authors at 2 institutions in 2 countries.

Mariam GoubranCenter of Excellence for Gastrointestinal Inflammation and Immunity Research, University of Alberta, Edmonton, AB T6G 2E1, Canada.
Weiwei WangCenter of Excellence for Gastrointestinal Inflammation and Immunity Research, University of Alberta, Edmonton, AB T6G 2E1, Canada.
Stanislav IndikDepartment of Virology, University of Veterinary Medicine, A-1210 Vienna, Austria.
Alexander FaschingerDepartment of Virology, University of Veterinary Medicine, A-1210 Vienna, Austria.
Shawn T WasilenkoCenter of Excellence for Gastrointestinal Inflammation and Immunity Research, University of Alberta, Edmonton, AB T6G 2E1, Canada.
Jasper BintnerCenter of Excellence for Gastrointestinal Inflammation and Immunity Research, University of Alberta, Edmonton, AB T6G 2E1, Canada.
Eric J CarpenterDepartment of Biological Sciences, University of Alberta, Edmonton, AB T6G 2E9, Canada.
Guangzhi ZhangCenter of Excellence for Gastrointestinal Inflammation and Immunity Research, University of Alberta, Edmonton, AB T6G 2E1, Canada.
Paulo NuinDepartment of Medical Genetics, University of Alberta, Edmonton, AB T6G 2E1, Canada.
Georgina MacintyreCenter of Excellence for Gastrointestinal Inflammation and Immunity Research, University of Alberta, Edmonton, AB T6G 2E1, Canada.
Gane K-S WongCenter of Excellence for Gastrointestinal Inflammation and Immunity Research, University of Alberta, Edmonton, AB T6G 2E1, Canada.
Andrew L MasonCenter of Excellence for Gastrointestinal Inflammation and Immunity Research, University of Alberta, Edmonton, AB T6G 2E1, Canada.
University of Alberta · CAUniversity of Veterinary Medicine Vienna · AT

Funding

CIHR MOP 114998CIHR MOP115154
6 · The paper itself

Abstract

A human betaretrovirus (HBRV) has been linked with the autoimmune liver disease, primary biliary cholangitis (PBC), and various cancers, including breast cancer and lymphoma. HBRV is closely related to the mouse mammary tumor virus, and represents the only exogenous betaretrovirus characterized in humans to date. Evidence of infection in patients with PBC has been demonstrated through the identification of proviral integration sites in lymphoid tissue, the major reservoir of infection, as well as biliary epithelium, which is the site of the disease process. Accordingly, we tested the hypothesis that patients with PBC harbor a transmissible betaretrovirus by co-cultivation of PBC patients' lymph node homogenates with the HS578T breast cancer line. Because of the low level of HBRV replication, betaretrovirus producing cells were subcloned to optimize viral isolation and production. Evidence of infection was provided by electron microscopy, RT-PCR, in situ hybridization, cloning of the HBRV proviral genome and demonstration of more than 3400 integration sites. Further evidence of viral transmissibility was demonstrated by infection of biliary epithelial cells. While HBRV did not show a preference for integration proximal to specific genomic features, analyses of common insertion sites revealed evidence of integration proximal to cancer associated genes. These studies demonstrate the isolation of HBRV with features similar to mouse mammary tumor virus and confirm that patients with PBC display evidence of a transmissible viral infection.

Indexed as

BetaretrovirusBreast NeoplasmsLiver Cirrhosis, BiliaryAnimalsFemaleHumansMammary Tumor Virus, MouseMiceProvirusesbiliary epithelial cells (BEC)common insertion sites (CIS)human betaretrovirus (HBRV)mouse mammary tumor virus (MMTV)primary biliary cholangitis (PBC)

Identifiers

PMID35632628
PMCPMC9146342
OpenAlexW4224439950

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.