Evidence map›Paper›PMID 35632614›Full record

ReviewViruses2022

Mass Spectrometry Approaches for SARS-CoV-2 Detection: Harnessing for Application in Food and Environmental Samples.

Esaú Bojórquez-Velázquez, Miriam Livier Llamas-García, José M Elizalde-Contreras, Jesús Alejandro Zamora-Briseño, Eliel Ruiz-May

Open access · goldAbstract readReview
In one paragraph

Review in Viruses, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
0.7field-weighted citation impact, top 31% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed, 7 citations in OpenAlex.

  1. Review
  2. Review
  3. Article
  4. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 2 institutions in 1 country.

Esaú Bojórquez-VelázquezRed de Estudios Moleculares Avanzados, Instituto de Ecología A. C., Cluster BioMimic®, Carretera Antigua a Coatepec 351, Xalapa, Veracruz CP 91073, Mexico.ORCID 0000-0003-1123-4286
Miriam Livier Llamas-GarcíaIPICYT, Instituto Potosino de Investigación Científica y Tecnológica A. C., Camino a la Presa San José 2055, San Luis Potosí, San Luis Potosí CP 78216, Mexico.ORCID 0000-0001-5144-710X
José M Elizalde-ContrerasRed de Estudios Moleculares Avanzados, Instituto de Ecología A. C., Cluster BioMimic®, Carretera Antigua a Coatepec 351, Xalapa, Veracruz CP 91073, Mexico.ORCID 0000-0003-0175-0930
Jesús Alejandro Zamora-BriseñoRed de Estudios Moleculares Avanzados, Instituto de Ecología A. C., Cluster BioMimic®, Carretera Antigua a Coatepec 351, Xalapa, Veracruz CP 91073, Mexico.ORCID 0000-0003-2079-9676
Eliel Ruiz-MayRed de Estudios Moleculares Avanzados, Instituto de Ecología A. C., Cluster BioMimic®, Carretera Antigua a Coatepec 351, Xalapa, Veracruz CP 91073, Mexico.ORCID 0000-0003-1416-4973
Instituto de Ecología · MXInstitute for Scientific and Technological Research · MX

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The public health crisis caused by the emergence of the Severe Acute Respiratory Syndrome Coronavirus 2 (SARS-CoV-2) in 2019 has drastically changed our lifestyle in virtually all contexts around the world. SARS-CoV-2 is mainly airborne, transmitted by the salivary droplets produced when infected people cough or sneeze. In addition, diarrhea symptoms and the detection of SARS-CoV-2 in feces suggest a fecal-oral route of contagion. Currently, the high demand for SARS-CoV-2 diagnosis has surpassed the availability of PCR and immunodetection probes and has prompted the development of other diagnostic alternatives. In this context, mass spectrometry (MS) represents a mature, robust alternative platform for detection of SARS-CoV-2 and other human viruses. This possibility has raised great interest worldwide. Therefore, it is time for the global application of MS as a feasible option for detecting SARS-CoV-2, not only in human fluids, but also in other matrices such as foods and wastewater. This review covers the most relevant established methods for MS-based SARS-CoV-2 detection and discusses the future application of these tools in different matrices. Significance: The Coronavirus Disease 2019 (COVID-19) pandemic highlighted the pros and cons of currently available PCR and immunodetection tools. The great concern over the infective potential of SARS-CoV-2 viral particles that can persist for several hours on different surfaces under various conditions further evidenced the need for reliable alternatives and high-throughput methods to meet the needs for mass detection of SARS-CoV-2. In this context, MS-based proteomics emerging from fundamental studies in life science can offer a robust option for SARS-CoV-2 detection in human fluids and other matrices. In addition, the substantial efforts towards detecting SARS-CoV-2 in clinal samples, position MS to support the detection of this virus in different matrices such as the surfaces of the packing food process, frozen foods, and wastewaters. Proteomics and mass spectrometry are, therefore, well positioned to play a role in the epidemiological control of COVID-19 and other future diseases. We are currently witnessing the opportunity to generate technologies to overcome prolonged pandemics for the first time in human history.

Indexed as

COVID-19SARS-CoV-2COVID-19 TestingHumansMass SpectrometryPolymerase Chain Reactionclinical samplesfoodsmass spectrometrySARS-CoV-2sewage water

Identifiers

PMID35632614
PMCPMC9144875
OpenAlexW4224324128

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.