Evidence map›Paper›PMID 35628677›Full record

ArticleJournal of fungi (Basel, Switzerland)2022

Exploring the Temporal Dynamics of the Fungal Microbiome in Rootstocks, the Lesser-Known Half of the Grapevine Crop.

David Gramaje, Aleš Eichmeier, Milan Spetik, María Julia Carbone, Rebeca Bujanda, Jessica Vallance, Patrice Rey

Open access · goldAbstract read
In one paragraph

Article in Journal of fungi (Basel, Switzerland), 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 13 papers.

0numbers the graph read from it
0cells of the map it votes in
13citing papers in PubMed
3.4field-weighted citation impact, top 7% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

13 citing papers in PubMed, 31 citations in OpenAlex.

  1. Article
  2. Review
  3. Article
  4. Review
  5. Article
  6. Article
  7. Insights into Grape Ripe Rot: A Focus on thePlants (Basel, Switzerland) · 2023
    Review
  8. Article
  9. Article
  10. Review
  11. Article
  12. Article
  13. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 5 institutions in 4 countries.

David GramajeInstituto de Ciencias de la Vid y del Vino (ICVV), Consejo Superior de Investigaciones Científicas, Universidad de la Rioja, Gobierno de La Rioja, Ctra. LO-20 Salida 13, Finca La Grajera, 26071 Logroño, Spain.ORCID 0000-0003-1755-3413
Aleš EichmeierFaculty of Horticulture, Mendeleum-Institute of Genetics, Mendel University in Brno, Valticka 334, 69144 Lednice, Czech Republic.ORCID 0000-0001-7358-3903
Milan SpetikFaculty of Horticulture, Mendeleum-Institute of Genetics, Mendel University in Brno, Valticka 334, 69144 Lednice, Czech Republic.ORCID 0000-0001-7659-8852
María Julia CarboneDepartamento de Protección Vegetal, Facultad de Agronomía, Universidad de la República, Montevideo 12900, Uruguay.ORCID 0000-0003-1845-9277
Rebeca BujandaInstituto de Ciencias de la Vid y del Vino (ICVV), Consejo Superior de Investigaciones Científicas, Universidad de la Rioja, Gobierno de La Rioja, Ctra. LO-20 Salida 13, Finca La Grajera, 26071 Logroño, Spain.
Jessica VallanceBordeaux Sciences Agro, INRAE, ISVV, SAVE, 33140 Villenave d'Ornon, France.
Patrice ReyBordeaux Sciences Agro, INRAE, ISVV, SAVE, 33140 Villenave d'Ornon, France.
Consejo Superior de Investigaciones Científicas · ESMendel University in Brno · CZCentre National de la Recherche Scientifique · FRUniversidad de la República de Uruguay · UYUniversité de Bordeaux · FR

Funding

Ministry of Education Youth and Sports CZ.02.1.01./0.0/0.0/16_017/0002334
6 · The paper itself

Abstract

Rootstocks are the link between the soil and scion in grapevines, can provide tolerance to abiotic and biotic stresses, and regulate yield and grape quality. The vascular system of grapevine rootstocks in nurseries is still an underexplored niche for research, despite its potential for hosting beneficial and pathogenic microorganisms. The purpose of this study was to investigate the changes in the composition of fungal communities in 110 Richter and 41 Berlandieri rootstocks at four stages of the grapevine propagation process. Taxonomic analysis revealed that the fungal community predominantly consisted of phylum Ascomycota in all stages of the propagation process. The alpha-diversity of fungal communities differed among sampling times for both rootstocks, with richness and fungal diversity in the vascular system decreasing through the propagation process. The core microbiome was composed of the genera

Indexed as

culture-independent analysisfungal microbiomegrapevine nurserygrapevine trunk diseaseshigh-throughput amplicon sequencingVitis vinifera

Identifiers

PMID35628677
PMCPMC9144578
OpenAlexW4226287420

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.