Evidence map›Paper›PMID 35628266›Full record

ArticleInternational journal of molecular sciences2022

Combined Transcriptome and Metabolome Analyses Reveal Candidate Genes Involved in Tangor (

Xiaoyi Bi, Ling Liao, Lijun Deng, Zhenghua Jin, Zehao Huang, Guochao Sun, Bo Xiong, Zhihui Wang

Open access · goldAbstract read
In one paragraph

Article in International journal of molecular sciences, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 14 papers.

0numbers the graph read from it
0cells of the map it votes in
14citing papers in PubMed
1.9field-weighted citation impact, top 14% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

14 citing papers in PubMed, 24 citations in OpenAlex.

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  14. Frontiers in plant science · 2022
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 1 institution in 1 country.

Xiaoyi BiCollege of Horticulture, Sichuan Agricultural University, Chengdu 611130, China.ORCID 0000-0001-8451-1120
Ling LiaoCollege of Horticulture, Sichuan Agricultural University, Chengdu 611130, China.ORCID 0000-0002-2860-8654
Lijun DengCollege of Horticulture, Sichuan Agricultural University, Chengdu 611130, China.
Zhenghua JinCollege of Horticulture, Sichuan Agricultural University, Chengdu 611130, China.
Zehao HuangCollege of Horticulture, Sichuan Agricultural University, Chengdu 611130, China.
Guochao SunInstitute of Pomology and Olericulture, Sichuan Agricultural University, Chengdu 611130, China.
Bo XiongCollege of Horticulture, Sichuan Agricultural University, Chengdu 611130, China.ORCID 0000-0002-1767-7478
Zhihui WangCollege of Horticulture, Sichuan Agricultural University, Chengdu 611130, China.ORCID 0000-0003-2234-144X
Sichuan Agricultural University · CN

Funding

Zhihui Wang 2021YFD1600800,2021YFYZ0023, 2021YFN0025
6 · The paper itself

Abstract

Tangor, an important citrus type, is a hybrid of orange and mandarin and possesses their advantageous characteristics. Fruit quality is an important factor limiting the development of the citrus industry and highly depends on fruit development and ripening programs. However, fruit development and quality formation have not been completely explored in mandarin-orange hybrids. We sequenced the metabolome and transcriptome of three mandarin-orange hybrid cultivars at the early fruiting [90 days after full bloom (DAFB)], color change (180 DAFB), and ripening (270 DAFB) stages. Metabolome sequencing was performed to preliminarily identify the accumulation patterns of primary and secondary metabolites related to fruit quality and hormones regulating fruit development. Transcriptome analysis showed that many genes related to primary metabolism, secondary metabolism, cell wall metabolism, phytohormones, and transcriptional regulation were up-regulated in all three cultivars during fruit development and ripening. Additionally, multiple key genes were identified that may play a role in sucrose, citric acid and flavonoid accumulation, cell wall modification, and abscisic acid signaling, which may provide a valuable resource for future research on enhancement of fruit quality of hybrid citrus. Overall, this study provides new insights into the molecular basis of pulp growth and development regulation and fruit quality formation in mandarin-orange hybrids.

Indexed as

CitrusCitrus sinensisFruitMetabolomeTranscriptomefruit developmentmandarin-orange hybridsmetabolomequality formationtranscriptome

Identifiers

PMID35628266
PMCPMC9141862
OpenAlexW4280504855

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.