Evidence map›Paper›PMID 35627195›Full record

ArticleGenes2022

Mitochondrial Pseudogenes Suggest Repeated Inter-Species Hybridization among Direct Human Ancestors.

Konstantin Popadin, Konstantin Gunbin, Leonid Peshkin, Sofia Annis, Zoe Fleischmann, Melissa Franco, Yevgenya Kraytsberg, Natalya Markuzon, Rebecca R Ackermann, Konstantin Khrapko

Open access · goldAbstract read
In one paragraph

Article in Genes, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed
15.6field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

5 citing papers in PubMed, 13 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 7 institutions in 5 countries.

Konstantin PopadinSchool of Life Sciences, École Polytechnique Fédérale de Lausanne, 1015 Lausanne, Switzerland.ORCID 0000-0002-2117-6086
Konstantin GunbinInstitut Gustave Roussy, 94805 Villejuif, France.
Leonid PeshkinDepartment of Genetics, Harvard Medical School, Boston, MA 02115, USA.ORCID 0000-0002-6420-848X
Sofia AnnisDepartment of Biology, Northeastern University, Boston, MA 02115, USA.
Zoe FleischmannDepartment of Biology, Northeastern University, Boston, MA 02115, USA.
Melissa FrancoDepartment of Biology, Northeastern University, Boston, MA 02115, USA.
Yevgenya KraytsbergBIDMC and Harvard Medical School, Boston, MA 02215, USA.
Natalya MarkuzonDraper Laboratory, Cambridge, MA 02139, USA.
Rebecca R AckermannHuman Evolution Research Institute, Department of Archaeology, University of Cape Town, Cape Town 7700, South Africa.
Konstantin KhrapkoDepartment of Biology, Northeastern University, Boston, MA 02115, USA.
Northeastern University · USBeth Israel Deaconess Medical Center · USDraper Laboratory · USHarvard University · USInstitut Gustave Roussy · FRSIB Swiss Institute of Bioinformatics · CHUniversity of Cape Town · ZA

Funding

Systems Analysis of cell type differentiation in Xenopus developmentR01HD073104 · NICHD · HARVARD MEDICAL SCHOOL · PI KIRSCHNER, MARC WALLACE, PESHKIN, LEON · 2012 to 2022
$6.7M
mtDNA phylogeny of the germ line: mechanism, structure and function of the mtDNA bottleneckR01HD091439 · NICHD · NORTHEASTERN UNIVERSITY · PI KHRAPKO, KONSTANTIN, TILLY, JONATHAN LEE · 2018 to 2022
$1.6M
NICHD NIH HHS R01 HD073104NICHD NIH HHS R01 HD091439NIH HHS R01-HD091439
6 · The paper itself

Abstract

The hypothesis that the evolution of humans involves hybridization between diverged species has been actively debated in recent years. We present the following novel evidence in support of this hypothesis: the analysis of nuclear pseudogenes of mtDNA ("NUMTs"). NUMTs are considered "mtDNA fossils" as they preserve sequences of ancient mtDNA and thus carry unique information about ancestral populations. Our comparison of a NUMT sequence shared by humans, chimpanzees, and gorillas with their mtDNAs implies that, around the time of divergence between humans and chimpanzees, our evolutionary history involved the interbreeding of individuals whose mtDNA had diverged as much as ~4.5 Myr prior. This large divergence suggests a distant interspecies hybridization. Additionally, analysis of two other NUMTs suggests that such events occur repeatedly. Our findings suggest a complex pattern of speciation in primate/human ancestors and provide one potential explanation for the mosaic nature of fossil morphology found at the emergence of the hominin lineage. A preliminary version of this manuscript was uploaded to the preprint server BioRxiv in 2017 (10.1101/134502).

Indexed as

HominidaePseudogenesAnimalsDNA, MitochondrialEvolution, MolecularHumansHybridization, GeneticMitochondriaDNA, Mitochondrialhuman evolutionhybridizationmtDNANUMT

Identifiers

PMID35627195
PMCPMC9140377
OpenAlexW4225254873

What OpenQuestion holds

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LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.