Evidence map›Paper›PMID 35626705›Full record

ArticleCells2022

Integrated Analysis of Cancer Tissue and Vitreous Humor from Retinoblastoma Eyes Reveals Unique Tumor-Specific Metabolic and Cellular Pathways in Advanced and Non-Advanced Tumors.

Vishnu Suresh Babu, Ashwin Mallipatna, Deepak Sa, Gagan Dudeja, Ramaraj Kannan, Rohit Shetty, Archana Padmanabhan Nair, Seetharamanjaneyulu Gundimeda, Shyam S Chaurasia, Navin Kumar Verma and 5 more

Open access · goldAbstract read
In one paragraph

Article in Cells, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 9 papers.

0numbers the graph read from it
0cells of the map it votes in
9citing papers in PubMed
2.4field-weighted citation impact, top 11% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

9 citing papers in PubMed, 14 citations in OpenAlex.

  1. Article
  2. AnInternational journal of ophthalmology · 2026
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

15 authors at 7 institutions in 5 countries.

Vishnu Suresh BabuGROW Research Laboratory, Narayana Nethralaya Foundation, Bangalore 560099, India.
Ashwin MallipatnaRetinoblastoma Service, Narayana Nethralaya, Bangalore 560099, India.
Deepak SaAgilent Technologies India Pvt Ltd., Bangalore 560048, India.
Gagan DudejaRetinoblastoma Service, Narayana Nethralaya, Bangalore 560099, India.
Ramaraj KannanGROW Research Laboratory, Narayana Nethralaya Foundation, Bangalore 560099, India.
Rohit ShettyGROW Research Laboratory, Narayana Nethralaya Foundation, Bangalore 560099, India.
Archana Padmanabhan NairGROW Research Laboratory, Narayana Nethralaya Foundation, Bangalore 560099, India.
Seetharamanjaneyulu GundimedaAgilent Technologies India Pvt Ltd., Bangalore 560048, India.
Shyam S ChaurasiaOphthalmology and Visual Sciences, Medical College of Wisconsin, Milwaukee, WI 53226, USA.ORCID 0000-0001-8725-676X
Navin Kumar VermaLee Kong Chian School of Medicine, Nanyang Technological University Singapore, Singapore 308232, Singapore.ORCID 0000-0002-5940-6633
Rajamani LakshminarayananSingapore Eye Research Institute, Singapore 169856, Singapore.ORCID 0000-0001-8214-5315
Stephane HeymansDepartment of Cardiology, Cardiovascular Research Institute Maastricht (CARIM), Maastricht University, 6229 ER Maastricht, The Netherlands.ORCID 0000-0001-9477-7803
Veluchamy A BarathiSingapore Eye Research Institute, Singapore 169856, Singapore.ORCID 0000-0002-6477-9784
Nilanjan GuhaAgilent Technologies India Pvt Ltd., Bangalore 560048, India.
Arkasubhra GhoshGROW Research Laboratory, Narayana Nethralaya Foundation, Bangalore 560099, India.ORCID 0000-0002-6570-5891
Narayana Nethralaya · INAgilent Technologies (India) · INMaastricht University · NLMedical College of Wisconsin · USNanyang Technological University · SGNational University of Singapore · SGSingapore Eye Research Institute · SG

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Retinoblastoma (Rb) is a pediatric intraocular malignancy that is proposed to originate from maturing cone cell precursors in the developing retina. The molecular mechanisms underlying the biological and clinical behaviors are important to understand in order to improve the management of advanced-stage tumors. While the genetic causes of Rb are known, an integrated understanding of the gene expression and metabolic processes in tumors of human eyes is deficient. By integrating transcriptomic profiling from tumor tissues and metabolomics from tumorous eye vitreous humor samples (with healthy, age-matched pediatric retinae and vitreous samples as controls), we uncover unique functional associations between genes and metabolites. We found distinct gene expression patterns between clinically advanced and non-advanced Rb. Global metabolomic analysis of the vitreous humor of the same Rb eyes revealed distinctly altered metabolites, indicating how tumor metabolism has diverged from healthy pediatric retina. Several key enzymes that are related to cellular energy production, such as hexokinase 1, were found to be reduced in a manner corresponding to altered metabolites; notably, a reduction in pyruvate levels. Similarly, E2F2 was the most significantly elevated E2F family member in our cohort that is part of the cell cycle regulatory circuit. Ectopic expression of the wild-type

Indexed as

Retinal NeoplasmsRetinoblastomaChildHexokinaseHumansRetinoblastoma ProteinVitreous BodyHexokinaseRetinoblastoma Proteincancerglycolysismetabolismmetabolomicsmulti-omicsretinoblastomatranscriptomics

Identifiers

PMID35626705
PMCPMC9139581
OpenAlexW4280504208

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.