Evidence map›Paper›PMID 35622862›Full record

ArticlePLoS genetics2022

Shade suppresses wound-induced leaf repositioning through a mechanism involving PHYTOCHROME KINASE SUBSTRATE (PKS) genes.

Anne-Sophie Fiorucci, Olivier Michaud, Emanuel Schmid-Siegert, Martine Trevisan, Laure Allenbach Petrolati, Yetkin Çaka Ince, Christian Fankhauser

Open access · goldAbstract read
In one paragraph

Article in PLoS genetics, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed
2.5field-weighted citation impact, top 11% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

5 citing papers in PubMed, 12 citations in OpenAlex.

  1. Evaporative cooling signals for wound healing in plants.bioRxiv : the preprint server for biology · 2025
    Article
  2. Review
  3. Review
  4. Light signaling as cellular integrator of multiple environmental cues in plants.Physiology and molecular biology of plants : an international journal of functional plant biology · 2023
    Review
  5. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 3 institutions in 2 countries.

Anne-Sophie FiorucciFaculty of Biology and Medicine, Centre for Integrative Genomics, University of Lausanne, Lausanne, Switzerland.ORCID 0000-0002-3254-5967
Olivier MichaudFaculty of Biology and Medicine, Centre for Integrative Genomics, University of Lausanne, Lausanne, Switzerland.ORCID 0000-0002-3245-5873
Emanuel Schmid-SiegertSIB-Swiss Institute of Bioinformatics, University of Lausanne, Lausanne, Switzerland.ORCID 0000-0003-1339-5120
Martine TrevisanFaculty of Biology and Medicine, Centre for Integrative Genomics, University of Lausanne, Lausanne, Switzerland.ORCID 0000-0002-6610-6954
Laure Allenbach PetrolatiFaculty of Biology and Medicine, Centre for Integrative Genomics, University of Lausanne, Lausanne, Switzerland.ORCID 0000-0002-9074-5350
Yetkin Çaka InceFaculty of Biology and Medicine, Centre for Integrative Genomics, University of Lausanne, Lausanne, Switzerland.ORCID 0000-0002-4395-8599
Christian FankhauserFaculty of Biology and Medicine, Centre for Integrative Genomics, University of Lausanne, Lausanne, Switzerland.ORCID 0000-0003-4719-5901
University of Lausanne · CHInstitut de Biologie Intégrative de la Cellule · FRSIB Swiss Institute of Bioinformatics · CH

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Shaded plants challenged with herbivores or pathogens prioritize growth over defense. However, most experiments have focused on the effect of shading light cues on defense responses. To investigate the potential interaction between shade-avoidance and wounding-induced Jasmonate (JA)-mediated signaling on leaf growth and movement, we used repetitive mechanical wounding of leaf blades to mimic herbivore attacks. Phenotyping experiments with combined treatments on Arabidopsis thaliana rosettes revealed that shade strongly inhibits the wound effect on leaf elevation. By contrast, petiole length is reduced by wounding both in the sun and in the shade. Thus, the relationship between the shade and wounding/JA pathways varies depending on the physiological response, implying that leaf growth and movement can be uncoupled. Using RNA-sequencing, we identified genes with expression patterns matching the hyponastic response (opposite regulation by both stimuli, interaction between treatments with shade dominating the wound signal). Among them were genes from the PKS (Phytochrome Kinase Substrate) family, which was previously studied for its role in phototropism and leaf positioning. Interestingly, we observed reduced shade suppression of the wounding effect in pks2pks4 double mutants while a PKS4 overexpressing line showed constitutively elevated leaves and was less sensitive to wounding. Our results indicate a trait-specific interrelationship between shade and wounding cues on Arabidopsis leaf growth and positioning. Moreover, we identify PKS genes as integrators of external cues in the control of leaf hyponasty further emphasizing the role of these genes in aerial organ positioning.

Indexed as

ArabidopsisArabidopsis ProteinsPhytochromeGene Expression Regulation, PlantLightPlant LeavesArabidopsis ProteinsPhytochrome

Identifiers

PMID35622862
PMCPMC9197076
OpenAlexW4281697351

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.