Evidence map›Paper›PMID 35621913›Full record

ArticleJournal of imaging2022

Deep Neural Network for Cardiac Magnetic Resonance Image Segmentation.

David Chen, Huzefa Bhopalwala, Nakeya Dewaswala, Shivaram P Arunachalam, Moein Enayati, Nasibeh Zanjirani Farahani, Kalyan Pasupathy, Sravani Lokineni, J Martijn Bos, Peter A Noseworthy and 6 more

Abstract read
In one paragraph

Article in Journal of imaging, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

5 citing papers in PubMed.

  1. Article
  2. Review
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

16 authors.

David ChenDepartment of Cardiovascular Surgery, Cleveland Clinic, Cleveland, OH 44195, USA.
Huzefa BhopalwalaDepartment of Cardiovascular Medicine, Mayo Clinic, Rochester, MN 55902, USA.ORCID 0000-0002-4289-7288
Nakeya DewaswalaDepartment of Cardiovascular Medicine, Mayo Clinic, Rochester, MN 55902, USA.ORCID 0000-0003-1637-3146
Shivaram P ArunachalamDepartment of Internal Medicine, Mayo Clinic, Rochester, MN 55902, USA.
Moein EnayatiCenter for the Science of Health Care Delivery, Mayo Clinic, Rochester, MN 55902, USA.ORCID 0000-0001-7391-774X
Nasibeh Zanjirani FarahaniDepartment of Cardiovascular Medicine, Mayo Clinic, Rochester, MN 55902, USA.
Kalyan PasupathyBiomedical and Health Information Sciences Department, University of Illinois, Chicago, IL 60612, USA.
Sravani LokineniDepartment of Cardiovascular Medicine, Mayo Clinic, Rochester, MN 55902, USA.
J Martijn BosDepartment of Cardiovascular Medicine, Mayo Clinic, Rochester, MN 55902, USA.
Peter A NoseworthyDepartment of Cardiovascular Medicine, Mayo Clinic, Rochester, MN 55902, USA.
Reza ArsanjaniDepartment of Cardiovascular Medicine, Mayo Clinic, Phoenix, AZ 85054, USA.
Bradley J EricksonDepartment of Radiology, Mayo Clinic, Rochester, MN 55902, USA.
Jeffrey B GeskeDepartment of Cardiovascular Medicine, Mayo Clinic, Rochester, MN 55902, USA.
Michael J AckermanDepartment of Cardiovascular Medicine, Mayo Clinic, Rochester, MN 55902, USA.
Philip A AraozDepartment of Radiology, Mayo Clinic, Rochester, MN 55902, USA.
Adelaide M Arruda-OlsonDepartment of Cardiovascular Medicine, Mayo Clinic, Rochester, MN 55902, USA.

Funding

Novel Informatics Approaches for Ascertainment of PAD Status and Adverse OutcomesK01HL124045 · NHLBI · MAYO CLINIC ROCHESTER · PI ARRUDA-OLSON, ADELAIDE MARIA MARTINS · 2015 to 2019
$820k
NHLBI NIH HHS K01 HL124045This work was supported by NHLBI K01HL124045, Mayo K2R award and the Tsai family Foundation Mayo K2R award
6 · The paper itself

Abstract

The analysis and interpretation of cardiac magnetic resonance (CMR) images are often time-consuming. The automated segmentation of cardiac structures can reduce the time required for image analysis. Spatial similarities between different CMR image types were leveraged to jointly segment multiple sequences using a segmentation model termed a multi-image type UNet (MI-UNet). This model was developed from 72 exams (46% female, mean age 63 ± 11 years) performed on patients with hypertrophic cardiomyopathy. The MI-UNet for steady-state free precession (SSFP) images achieved a superior Dice similarity coefficient (DSC) of 0.92 ± 0.06 compared to 0.87 ± 0.08 for a single-image type UNet (p < 0.001). The MI-UNet for late gadolinium enhancement (LGE) images also had a superior DSC of 0.86 ± 0.11 compared to 0.78 ± 0.11 for a single-image type UNet (p = 0.001). The difference across image types was most evident for the left ventricular myocardium in SSFP images and for both the left ventricular cavity and the left ventricular myocardium in LGE images. For the right ventricle, there were no differences in DCS when comparing the MI-UNet with single-image type UNets. The joint segmentation of multiple image types increases segmentation accuracy for CMR images of the left ventricle compared to single-image models. In clinical practice, the MI-UNet model may expedite the analysis and interpretation of CMR images of multiple types.

Indexed as

cardiac magnetic resonance imagingdeep learninghypertrophic cardiomyopathyimage segmentation

Identifiers

PMID35621913
PMCPMC9144248

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.