Evidence map›Paper›PMID 35621390›Full record

ArticleMolecular ecology2022

Host genomic influence on bacterial composition in the switchgrass rhizosphere.

Jeremy Sutherland, Terrence Bell, Ryan V Trexler, John E Carlson, Jesse R Lasky

Open access · greenAbstract read
In one paragraph

Article in Molecular ecology, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 11 papers.

0numbers the graph read from it
0cells of the map it votes in
11citing papers in PubMed
7.1field-weighted citation impact, top 3% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

11 citing papers in PubMed, 32 citations in OpenAlex.

  1. Plant influence shapesMicrobiology spectrum · 2026
    Article
  2. Heritability of theFrontiers in plant science · 2026
    Article
  3. Article
  4. Article
  5. Article
  6. Review
  7. Article
  8. Article
  9. Endophytic bacterial communities in wild rice (Frontiers in plant science · 2023
    Article
  10. Article
  11. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 1 institution in 1 country.

Jeremy SutherlandDepartment of Plant Pathology and Environmental Microbiology, The Pennsylvania State University, University Park, Pennsylvania, USA.ORCID 0000-0003-3535-0302
Terrence BellDepartment of Plant Pathology and Environmental Microbiology, The Pennsylvania State University, University Park, Pennsylvania, USA.ORCID 0000-0003-3603-7270
Ryan V TrexlerDepartment of Biology, The Pennsylvania State University, University Park, Pennsylvania, USA.ORCID 0000-0002-8321-6127
John E CarlsonIntercollege Graduate Degree Program in Bioinformatics and Genomics, The Pennsylvania State University, University Park, Pennsylvania, USA.
Jesse R LaskyDepartment of Biology, The Pennsylvania State University, University Park, Pennsylvania, USA.ORCID 0000-0001-7688-5296
Pennsylvania State University · US

Funding

Evolutionary genetics of genotype-by-environment interactions for complex traitsR35GM138300 · NIGMS · PENNSYLVANIA STATE UNIVERSITY, THE · PI LASKY, JESSE · 2020 to 2024
$1.8M
NIGMS NIH HHS R35 GM138300
6 · The paper itself

Abstract

Host genetic variation can shape the diversity and composition of associated microbiomes, which may reciprocally influence host traits and performance. While the genetic basis of phenotypic diversity of plant populations in nature has been studied, comparatively little research has investigated the genetics of host effects on their associated microbiomes. Switchgrass (Panicum virgatum) is a highly outcrossing, perennial, grass species with substantial locally adaptive diversity across its native North American range. Here, we compared 383 switchgrass accessions in a common garden to determine the host genotypic influence on rhizosphere bacterial composition. We hypothesized that the composition and diversity of rhizosphere bacterial assemblages would differentiate due to genotypic differences between hosts (potentially due to root phenotypes and associated life history variation). We observed higher alpha diversity of bacteria associated with upland ecotypes and tetraploids, compared to lowland ecotypes and octoploids, respectively. Alpha diversity correlated negatively with flowering time and plant height, indicating that bacterial composition varies along switchgrass life history axes. Narrow-sense heritability (h

Indexed as

PanicumBacteriaGenetic VariationGenome-Wide Association StudyGenomicsRhizosphereTetraploidyheritabilityhost genomic influencemicrobiomerhizosphereswitchgrass

Identifiers

PMID35621390
PMCPMC10150372
OpenAlexW4281708888

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.