Evidence map›Paper›PMID 35618955›Full record

ReviewNature methods2022

Best practice standards for circular RNA research.

Anne F Nielsen, Albrecht Bindereif, Irene Bozzoni, Mor Hanan, Thomas B Hansen, Manuel Irimia, Sebastian Kadener, Lasse S Kristensen, Ivano Legnini, Mariangela Morlando and 6 more

Open access · goldAbstract readReview
In one paragraph

Review in Nature methods, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 140 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
140citing papers in PubMed, 1 pooled it
15.4field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

140 citing papers in PubMed, 1 synthesis or guideline pooled it, 189 citations in OpenAlex.

  1. Pooled it
  2. Review
  3. Article
  4. Review
  5. Review
  6. Review
  7. Review
  8. Article
  9. Circular RNA circLAMC1 Promotes Liver Regeneration by Regulating the miR-138-5p/Gnai2 Axis.FASEB journal : official publication of the Federation of American Societies for Experimental Biology · 2026
    Article
  10. Article
  11. Article
  12. Article
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  14. BRCA1P1 immunotherapy requires pseudogene-aware transcriptomics.Proceedings of the National Academy of Sciences of the United States of America · 2026
    Article
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  17. Acta pharmaceutica Sinica. B · 2026
    Review
  18. Article
  19. Review
  20. Article

80 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

16 authors at 10 institutions in 9 countries.

Anne F NielsenInterdisciplinary Nanoscience Center, Aarhus University, Aarhus, Denmark.ORCID http://orcid.org/0000-0003-2653-4863
Albrecht BindereifDepartment of Biology and Chemistry, Institute of Biochemistry, Justus Liebig University of Giessen, Giessen, Germany.
Irene BozzoniDepartment of Biology and Biotechnology, Charles Darwin, and Center for Life Nano- & Neuro-Science, Fondazione Istituto Italiano di Tecnologia (IIT), Sapienza University of Rome, Rome, Italy.ORCID http://orcid.org/0000-0002-3485-8537
Mor HananDepartment of Biological Chemistry, The Institute of Life Sciences, The Hebrew University of Jerusalem, Jerusalem, Israel.
Thomas B HansenDepartment of Molecular Biology and Genetics, Aarhus University, Aarhus, Denmark.
Manuel IrimiaCentre for Genomic Regulation, Barcelona Institute of Science and Technology (BIST), Barcelona, Spain.
Sebastian KadenerBiology Department, Brandeis University, Waltham, MA, USA.
Lasse S KristensenDepartment of Biomedicine, Aarhus University, Aarhus, Denmark.ORCID http://orcid.org/0000-0002-5980-7939
Ivano LegniniBerlin Institute for Medical Systems Biology, Max Delbrück Center for Molecular Medicine in the Helmholtz Association, Berlin, Germany.ORCID http://orcid.org/0000-0002-8984-5215
Mariangela MorlandoDepartment of Pharmaceutical Sciences, 'Department of Excellence 2018-2022', University of Perugia, Perugia, Italy.
Morten T Jarlstad OlesenDepartment of Biomedicine, Aarhus University, Aarhus, Denmark.
R Jeroen PasterkampDepartment of Translational Neuroscience, University Medical Center Utrecht Brain Center, Utrecht University, Utrecht, the Netherlands.ORCID http://orcid.org/0000-0003-1631-6440
Stephan PreibischBerlin Institute for Medical Systems Biology, Max Delbrück Center for Molecular Medicine in the Helmholtz Association, Berlin, Germany.ORCID http://orcid.org/0000-0002-0276-494X
Nikolaus RajewskyBerlin Institute for Medical Systems Biology, Max Delbrück Center for Molecular Medicine in the Helmholtz Association, Berlin, Germany.ORCID http://orcid.org/0000-0002-4785-4332
Christin SuenkelBerlin Institute for Medical Systems Biology, Max Delbrück Center for Molecular Medicine in the Helmholtz Association, Berlin, Germany.
Jørgen KjemsInterdisciplinary Nanoscience Center, Aarhus University, Aarhus, Denmark. jk@mbg.au.dk.ORCID http://orcid.org/0000-0003-4128-9317
Aarhus University · DKMax Delbrück Center · DEBrandeis University · USHebrew University of Jerusalem · ILInstitució Catalana de Recerca i Estudis Avançats · ESItalian Institute of Technology · ITJanelia Research Campus · USJustus-Liebig-Universität Gießen · DEUniversity of Perugia · ITUtrecht University · NL

Funding

Uncovering the links between circRNA accumulation, translation and agingR01AG057700 · NIA · BRANDEIS UNIVERSITY · PI KADENER, SEBASTIAN, MARR, MICHAEL THOMAS · 2018 to 2022
$3.4M
Unraveling regulatory functions of circRNAs at the muscleblind locusR01GM124406 · NIGMS · BRANDEIS UNIVERSITY · PI Sebastian Kadener · 2017 to 2026
$2.4M
Mechanisms underlying disruption of intestinal epithelial barrier in critical illnessR01GM122406 · NIGMS · LURIE CHILDREN'S HOSPITAL OF CHICAGO · PI TAN, XIAO-DI · 2017 to 2018
$594k
Howard Hughes Medical InstituteNIA NIH HHS R01 AG057700NIGMS NIH HHS R01 GM122406NIGMS NIH HHS R01 GM124406
6 · The paper itself

Abstract

Circular RNAs (circRNAs) are formed in all domains of life and via different mechanisms. There has been an explosion in the number of circRNA papers in recent years; however, as a relatively young field, circRNA biology has an urgent need for common experimental standards for isolating, analyzing, expressing and depleting circRNAs. Here we propose a set of guidelines for circRNA studies based on the authors' experience. This Perspective will specifically address the major class of circRNAs in Eukarya that are generated by a spliceosome-catalyzed back-splicing event. We hope that the implementation of best practice principles for circRNA research will help move the field forward and allow a better functional understanding of this fascinating group of RNAs.

Indexed as

RNARNA, CircularRNA SplicingRNARNA, Circular

Identifiers

PMID35618955
PMCPMC9759028
OpenAlexW4281568005

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.