Evidence map›Paper›PMID 35618793›Full record

ArticleScientific reports2022

Different DNA methylome, transcriptome and histological features in uterine fibroids with and without MED12 mutations.

Ryo Maekawa, Shun Sato, Tetsuro Tamehisa, Takahiro Sakai, Takuya Kajimura, Kotaro Sueoka, Norihiro Sugino

Open access · goldAbstract read
In one paragraph

Article in Scientific reports, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 16 papers.

0numbers the graph read from it
0cells of the map it votes in
16citing papers in PubMed
3.5field-weighted citation impact, top 7% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

16 citing papers in PubMed, 21 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 1 institution in 1 country.

Ryo MaekawaDepartment of Obstetrics and Gynecology, Yamaguchi University Graduate School of Medicine, Ube, 755-8505, Japan. rmaekawa@yamaguchi-u.ac.jp.
Shun SatoDepartment of Obstetrics and Gynecology, Yamaguchi University Graduate School of Medicine, Ube, 755-8505, Japan.
Tetsuro TamehisaDepartment of Obstetrics and Gynecology, Yamaguchi University Graduate School of Medicine, Ube, 755-8505, Japan.
Takahiro SakaiDepartment of Obstetrics and Gynecology, Yamaguchi University Graduate School of Medicine, Ube, 755-8505, Japan.
Takuya KajimuraDepartment of Obstetrics and Gynecology, Yamaguchi University Graduate School of Medicine, Ube, 755-8505, Japan.
Kotaro SueokaDepartment of Obstetrics and Gynecology, Yamaguchi University Graduate School of Medicine, Ube, 755-8505, Japan.
Norihiro SuginoDepartment of Obstetrics and Gynecology, Yamaguchi University Graduate School of Medicine, Ube, 755-8505, Japan.
Yamaguchi University · JP

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Somatic mutations in Mediator complex subunit 12 (MED12m) have been reported as a biomarker of uterine fibroids (UFs). However, the role of MED12m is still unclear in the pathogenesis of UFs. Therefore, we investigated the differences in DNA methylome, transcriptome, and histological features between MED12m-positive and -negative UFs. DNA methylomes and transcriptomes were obtained from MED12m-positive and -negative UFs and myometrium, and hierarchically clustered. Differentially expressed genes in comparison with the myometrium and co-expressed genes detected by weighted gene co-expression network analysis were subjected to gene ontology enrichment analyses. The amounts of collagen fibers and the number of blood vessels and smooth muscle cells were histologically evaluated. Hierarchical clustering based on DNA methylation clearly separated the myometrium, MED12m-positive, and MED12m-negative UFs. MED12m-positive UFs had the increased activities of extracellular matrix formation, whereas MED12m-negative UFs had the increased angiogenic activities and smooth muscle cell proliferation. The MED12m-positive and -negative UFs had different DNA methylation, gene expression, and histological features. The MED12m-positive UFs form the tumor with a rich extracellular matrix and poor blood vessels and smooth muscle cells compared to the MED12m-negative UFs, suggesting MED12 mutations affect the tissue composition of UFs.

Indexed as

EpigenomeLeiomyomaFemaleHumansMediator ComplexMutationMyometriumTranscription FactorsTranscriptomeMED12 protein, humanMediator ComplexTranscription Factors

Identifiers

PMID35618793
PMCPMC9135739
OpenAlexW4281569119

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.