Evidence map›Paper›PMID 35618774›Full record

ArticleNature microbiology2022

Immunosuppression broadens evolutionary pathways to drug resistance and treatment failure during Acinetobacter baumannii pneumonia in mice.

Wenwen Huo, Lindsay M Busch, Juan Hernandez-Bird, Efrat Hamami, Christopher W Marshall, Edward Geisinger, Vaughn S Cooper, Tim van Opijnen, Jason W Rosch, Ralph R Isberg

Open access · hybridAbstract read
In one paragraph

Article in Nature microbiology, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 45 papers.

0numbers the graph read from it
0cells of the map it votes in
45citing papers in PubMed
3.2field-weighted citation impact, top 6% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

45 citing papers in PubMed, 48 citations in OpenAlex.

  1. Review
  2. Climate change and antimicrobial resistance.Nature reviews. Microbiology · 2026
    Review
  3. Article
  4. Antibacterial and Immunomodulatory Effects ofInternational journal of molecular sciences · 2026
    Article
  5. Article
  6. Article
  7. Article
  8. Resistance, heteroresistance, and fitness costs drive colistin treatment failure duringProceedings of the National Academy of Sciences of the United States of America · 2026
    Article
  9. Article
  10. Review
  11. Article
  12. Article
  13. Article
  14. Journal of bacteriology · 2025
    Article
  15. Prevalence and Resistance Profiles ofAntibiotics (Basel, Switzerland) · 2025
    Review
  16. Article
  17. The role of innate immunity, antibiotics, and bacteriophages in the course of bacterial infections and their treatment.Proceedings of the National Academy of Sciences of the United States of America · 2025
    Article
  18. Article
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 6 institutions in 1 country.

Wenwen Huo *Department of Molecular Biology and Microbiology, Tufts University School of Medicine, Boston, MA, USA.ORCID http://orcid.org/0000-0001-5112-1951
Lindsay M Busch *Department of Molecular Biology and Microbiology, Tufts University School of Medicine, Boston, MA, USA.
Juan Hernandez-BirdDepartment of Molecular Biology and Microbiology, Tufts University School of Medicine, Boston, MA, USA.
Efrat HamamiDepartment of Molecular Biology and Microbiology, Tufts University School of Medicine, Boston, MA, USA.
Christopher W MarshallDepartment of Microbiology and Molecular Genetics and Center for Evolutionary Biology and Medicine, University of Pittsburgh School of Medicine, Pittsburgh, PA, USA.
Edward GeisingerDepartment of Biology, Northeastern University, Boston, MA, USA.ORCID http://orcid.org/0000-0001-9661-8072
Vaughn S CooperDepartment of Microbiology and Molecular Genetics and Center for Evolutionary Biology and Medicine, University of Pittsburgh School of Medicine, Pittsburgh, PA, USA.ORCID http://orcid.org/0000-0001-7726-0765
Tim van OpijnenDepartment of Biology, Boston College, Boston, MA, USA.ORCID http://orcid.org/0000-0001-6895-6795
Jason W RoschDepartment of Infectious Diseases, St Jude Children's Research Hospital, Memphis, TN, USA.ORCID http://orcid.org/0000-0002-1798-1760
Ralph R IsbergDepartment of Molecular Biology and Microbiology, Tufts University School of Medicine, Boston, MA, USA. Ralph.Isberg@tufts.edu.ORCID http://orcid.org/0000-0002-8330-3554
Tufts University · USBoston College · USMarquette University · USNortheastern University · USSt. Jude Children's Research Hospital · USUniversity of Pittsburgh · US

Funding

Innovative technologies to transform antibiotic discovery. Project 4 Infection site-specific amplification of antimicrobial conjugatesU19AI142780 · NIAID · BROAD INSTITUTE, INC. · PI HUNG, DEBORAH T · 2019 to 2023
$33.9M
Predicting the emergence of antibiotic resistance through multi-omics approaches and Immune System-surveillanU01AI124302 · NIAID · BOSTON COLLEGE · PI BENTO, JOSE, COOPER, VAUGHN · 2016 to 2020
$10.2M
MOLECULAR ANALYSIS OF MICROBIAL PATHOGENST32AI007422 · NIAID · TUFTS UNIVERSITY BOSTON · PI Ralph R. Isberg · 1992 to 2026
$5.7M
Identification of the Achilles’ heel in Acinetobacter fluoroquinolone-resistant mutantsR21AI128328 · NIAID · TUFTS UNIVERSITY BOSTON · PI ISBERG, RALPH R. · 2017 to 2018
$454k
NIAID NIH HHS R21 AI128328NIAID NIH HHS T32 AI007422NIAID NIH HHS U01 AI124302NIAID NIH HHS U19 AI142780
6 · The paper itself

Abstract

Acinetobacter baumannii is increasingly refractory to antibiotic treatment in healthcare settings. As is true of most human pathogens, the genetic path to antimicrobial resistance (AMR) and the role that the immune system plays in modulating AMR during disease are poorly understood. Here we reproduced several routes to fluoroquinolone resistance, performing evolution experiments using sequential lung infections in mice that are replete with or depleted of neutrophils, providing two key insights into the evolution of drug resistance. First, neutropenic hosts acted as reservoirs for the accumulation of drug resistance during drug treatment. Selection for variants with altered drug sensitivity profiles arose readily in the absence of neutrophils, while immunocompetent animals restricted the appearance of these variants. Secondly, antibiotic treatment failure in the immunocompromised host was shown to occur without clinically defined resistance, an unexpected result that provides a model for how antibiotic failure occurs clinically in the absence of AMR. The genetic mechanism underlying both these results is initiated by mutations activating the drug egress pump regulator AdeL, which drives persistence in the presence of antibiotic. Therefore, antibiotic persistence mutations present a two-pronged risk during disease, causing drug treatment failure in the immunocompromised host while simultaneously increasing the emergence of high-level AMR.

Indexed as

Acinetobacter baumanniiAcinetobacter InfectionsAnimalsAnti-Bacterial AgentsDrug Resistance, Multiple, BacterialImmunosuppression TherapyMiceTreatment FailureAnti-Bacterial Agents

Identifiers

PMID35618774
PMCPMC9159950
OpenAlexW4281645385

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.