Evidence map›Paper›PMID 35618717›Full record

ArticleNature communications2022

Insights into methionine S-methylation in diverse organisms.

Ming Peng, Chun-Yang Li, Xiu-Lan Chen, Beth T Williams, Kang Li, Ya-Nan Gao, Peng Wang, Ning Wang, Chao Gao, Shan Zhang and 6 more

Open access · goldAbstract read
In one paragraph

Article in Nature communications, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 7 papers.

0numbers the graph read from it
0cells of the map it votes in
7citing papers in PubMed
4.7field-weighted citation impact, top 5% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

7 citing papers in PubMed, 31 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

16 authors at 5 institutions in 3 countries.

Ming Peng *Frontiers Science Center for Deep Ocean Multispheres and Earth System & College of Marine Life Sciences, Ocean University of China, Qingdao, China.
Chun-Yang Li *Frontiers Science Center for Deep Ocean Multispheres and Earth System & College of Marine Life Sciences, Ocean University of China, Qingdao, China. Lcy@ouc.edu.cn.ORCID 0000-0002-1151-4897
Xiu-Lan ChenState Key Laboratory of Microbial Technology, Marine Biotechnology Research Center, Shandong University, Qingdao, China.ORCID 0000-0003-2991-3631
Beth T WilliamsSchool of Biological Sciences, University of East Anglia, Norwich Research Park, Norwich, UK.
Kang LiLaboratory for Marine Biology and Biotechnology, Pilot National Laboratory for Marine Science and Technology, Qingdao, China.
Ya-Nan GaoFrontiers Science Center for Deep Ocean Multispheres and Earth System & College of Marine Life Sciences, Ocean University of China, Qingdao, China.
Peng WangFrontiers Science Center for Deep Ocean Multispheres and Earth System & College of Marine Life Sciences, Ocean University of China, Qingdao, China.
Ning WangState Key Laboratory of Microbial Technology, Marine Biotechnology Research Center, Shandong University, Qingdao, China.
Chao GaoState Key Laboratory of Microbial Technology, Marine Biotechnology Research Center, Shandong University, Qingdao, China.
Shan ZhangState Key Laboratory of Microbial Technology, Marine Biotechnology Research Center, Shandong University, Qingdao, China.
Marie C SchoelmerichDepartment of Earth and Planetary Science, Innovative Genomics Institute Building, University of California, Berkeley, Berkeley, CA, USA.
Jillian F BanfieldDepartment of Earth and Planetary Science, Innovative Genomics Institute Building, University of California, Berkeley, Berkeley, CA, USA.
J Benjamin MillerSchool of Biological Sciences, University of East Anglia, Norwich Research Park, Norwich, UK.ORCID 0000-0003-0882-033X
Nick E Le BrunCentre for Molecular and Structural Biochemistry, School of Chemistry, University of East Anglia, Norwich Research Park, Norwich, UK.ORCID 0000-0001-9780-4061
Jonathan D ToddSchool of Biological Sciences, University of East Anglia, Norwich Research Park, Norwich, UK. Jonathan.Todd@uea.ac.uk.ORCID 0000-0003-0777-9312
Yu-Zhong ZhangFrontiers Science Center for Deep Ocean Multispheres and Earth System & College of Marine Life Sciences, Ocean University of China, Qingdao, China. zhangyz@sdu.edu.cn.ORCID 0000-0002-2017-1005
Shandong University · CNUniversity of East Anglia · GBOcean University of China · CNInnovative Genomics Institute · USQingdao National Laboratory for Marine Science and Technology · CN

Funding

Biotechnology and Biological Sciences Research Council BB/P006140/1
6 · The paper itself

Abstract

Dimethylsulfoniopropionate (DMSP) is an important marine anti-stress compound, with key roles in global nutrient cycling, chemotaxis and, potentially, climate regulation. Recently, diverse marine Actinobacteria, α- and γ-proteobacteria were shown to initiate DMSP synthesis via the methionine (Met) S-methyltransferase enzyme (MmtN), generating S-methyl-Met (SMM). Here we characterize a roseobacterial MmtN, providing structural and mechanistic insights into this DMSP synthesis enzyme. We propose that MmtN uses the proximity and desolvation mechanism for Met S-methylation with two adjacent MmtN monomers comprising the Met binding site. We also identify diverse functional MmtN enzymes in potentially symbiotic archaeal Candidatus Woesearchaeota and Candidate Phyla Radiation (CPR) bacteria, and the animalcule Adineta steineri, not anticipated to produce SMM and/or DMSP. These diverse MmtN enzymes, alongside the larger plant MMT enzyme with an N-terminus homologous to MmtN, likely utilize the same proximity and desolvation mechanism. This study provides important insights into the catalytic mechanism of SMM and/or DMSP production, and proposes roles for these compounds in secondary metabolite production, and SMM cycling in diverse organisms and environments.

Indexed as

MethionineMethyltransferasesBacteriaMethylationMethionineMethyltransferases

Identifiers

PMID35618717
PMCPMC9135737
OpenAlexW4281552222

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.