Evidence map›Paper›PMID 35616707›Full record

ArticleMolecular genetics and genomics : MGG2022

Transcriptome and metabolome profiling in different stages of infestation of Eucalyptus urophylla clones by Ralstonia solanacearum.

Yang Xiaohui, Huang Jie, Yang Huixiao, Liao Huanqin, Xu Fang, Zhu Baozhu, Xu Xiuyu, Zhang Lei, Huang Huayi, Du Qingzhang and 1 more

Abstract read
PubMed Publisher
In one paragraph

Article in Molecular genetics and genomics : MGG, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed
0.8field-weighted citation impact, top 22% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

5 citing papers in PubMed, 6 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Review
  5. Changes in the Histology of Walnut (International journal of molecular sciences · 2023
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors at 3 institutions in 1 country.

Yang Xiaohui *Guangdong Provincial Key Laboratory of Silviculture, Protection and Utilization, No. 233, Guangshan First Road, Guangzhou, 510520, Guangdong, People's Republic of China.
Huang Jie *Guangdong Provincial Key Laboratory of Silviculture, Protection and Utilization, No. 233, Guangshan First Road, Guangzhou, 510520, Guangdong, People's Republic of China.
Yang Huixiao *Guangdong Provincial Key Laboratory of Silviculture, Protection and Utilization, No. 233, Guangshan First Road, Guangzhou, 510520, Guangdong, People's Republic of China.
Liao HuanqinGuangdong Provincial Key Laboratory of Silviculture, Protection and Utilization, No. 233, Guangshan First Road, Guangzhou, 510520, Guangdong, People's Republic of China.
Xu FangGuangdong Provincial Key Laboratory of Silviculture, Protection and Utilization, No. 233, Guangshan First Road, Guangzhou, 510520, Guangdong, People's Republic of China.
Zhu BaozhuGuangdong Provincial Key Laboratory of Silviculture, Protection and Utilization, No. 233, Guangshan First Road, Guangzhou, 510520, Guangdong, People's Republic of China.
Xu XiuyuGuangdong Provincial Key Laboratory of Silviculture, Protection and Utilization, No. 233, Guangshan First Road, Guangzhou, 510520, Guangdong, People's Republic of China.
Zhang LeiDongmen State Forestry Farm of Guangxi Zhuang, No. 10, Jinlong Road, Fusui, 532108, Guangxi, People's Republic of China.
Huang HuayiGuangdong Provincial Key Laboratory of Silviculture, Protection and Utilization, No. 233, Guangshan First Road, Guangzhou, 510520, Guangdong, People's Republic of China.
Du QingzhangNational Engineering Laboratory for Tree Breeding, College of Biological Sciences and Technology, Beijing Forestry University, No. 35 Qinghua East Road, Beijing, 100083, China. qingzhangdu@bjfu.edu.cn.
Pan WenGuangdong Provincial Key Laboratory of Silviculture, Protection and Utilization, No. 233, Guangshan First Road, Guangzhou, 510520, Guangdong, People's Republic of China. panwen@sinogaf.cn.ORCID http://orcid.org/0000-0003-2853-1885
Guangdong Academy of Forestry · CNBeijing Forestry University · CNExperimental Center of Forestry in North China · CN

Funding

Natural Science Foundation for Young Scientists 31700590
6 · The paper itself

Abstract

Eucalyptus urophylla is an economically important tree species that widely planted in tropical and sub-tropical areas around the world, which suffers significant losses due to Ralstonia solanacearum. However, little is known about the molecular mechanism of pathogen-response of Eucalyptus. We collected the vascular tissues of a E. urophylla clone infected by R. solanacearum in the laboratory, and combined transcriptome and metabolome analysis to investigate the defense responses of Eucalyptus. A total of 11 flavonoids that differentially accumulated at the first stage or a later stage after infection. The phenylpropanoid of p-coumaraldehyde, the two alkaloids trigonelline and DL-ephedrine, two types of traditional Chinese medicine with patchouli alcohol and 3-dihydrocadambine, and the amino acid phenylalanine were differentially accumulated after infection, which could be biomarkers indicating a response to R. solanacearum. Differentially expressed genes involved in plant hormone signal transduction, phenylpropanoids, flavonoids, mitogen-activated protein kinase (MAPK) signaling, and amino acid metabolism were activated at the first stage of infection or a later stage, indicating that they may participate in the defense against infection. This study is expected to deliver several insights into the molecular mechanism in response to pathogens in E. urophylla, and the findings have far-reaching implications in the control of E. urophylla pathogens.

Indexed as

EucalyptusRalstonia solanacearumAmino AcidsClone CellsFlavonoidsMetabolomePlant DiseasesTranscriptomeAmino AcidsFlavonoidsDisease responseEucalyptusFlavonoidMetabolitesPhytohormoneRalstonia solanacearum

Identifiers

PMID35616707
OpenAlexW4281559065

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.