ArticleDatabase : the journal of biological databases and curation2022
GrainGenes: a data-rich repository for small grains genetics and genomics.
Article in Database : the journal of biological databases and curation, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 56 papers.
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Who cites it
56 citing papers in PubMed, 89 citations in OpenAlex.
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- Genome-wide association studies reveal genomic regions for kernel-related traits in durum wheat.TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik · 2026Article
- Discovery and mapping of a new gene in wheat for race-specific adult plant resistance to Puccinia striiformis f. sp. tritici.TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik · 2026Article
- Identifying marker-trait associations for wheat stem sawfly resistance.TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik · 2026Article
- Resistance to the oat leaf blotch pathogen (Pyrenophora avenae) is delimited to a region of chromosome 1D that harbors a candidate resistance kinase fusion protein.TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik · 2026Article
- A wheat MYB transcription factor activates defense by repressing TaSIZ1 in response to branched-chain amino acid accumulation.The Plant cell · 2026Article
- Globalization in the Healthcare Industry: Drivers, Risks, and Adaptation.Healthcare (Basel, Switzerland) · 2026Review
- From structural pangenomes to functional panomics in plants.Molecular biology and evolution · 2026Review
- Spatial coordination between leaf gradient and temperature response in barley.The Plant journal : for cell and molecular biology · 2026Article
- Accessing crop genetic diversity via pangenomics.TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik · 2026Review
- Identification and association mapping of sources of stem rust resistance in the wild barley diversity panel effective against virulent isolates from the Pacific Northwest.G3 (Bethesda, Md.) · 2026Article
- Current status and future perspective of genomics-assisted breeding in wheat (Breeding science · 2026Article
- QTL mapping of oat crown rust resistance in Australian fields and identification of a seedling resistance locus in oat line GS7.TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik · 2026Article
- Molecular mapping of QTLs for stripe rust resistance in bread wheat (Triticum aestivum L.).BMC plant biology · 2026Article
- Exploring standing genetic variation for barley leaf rust resistance in Australian breeding panel.TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik · 2026Article
- Whole-genome resequencing of the wild barley diversity collection: a resource for identifying and exploiting genetic variation for cultivated barley improvement.G3 (Bethesda, Md.) · 2026Article
- A pangenome and pantranscriptome of hexaploid oat.Nature · 2026Article
- QTL rich genomic clusters in wheat: a catalogue for resistance toFrontiers in plant science · 2026Review
- Bioinformatics in crop research: using genomic data for crop improvement.Frontiers in plant science · 2026Review
- Genetic Control of Grain Protein and Gluten Content: Winter vs. Spring Wheat.International journal of molecular sciences · 2025Article
Corrections and comments
PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.
Authors and funding
14 authors at 7 institutions in 2 countries.
Funding
No grant is acknowledged in the PubMed record.
Abstract
As one of the US Department of Agriculture-Agricultural Research Service flagship databases, GrainGenes (https://wheat.pw.usda.gov) serves the data and community needs of globally distributed small grains researchers for the genetic improvement of the Triticeae family and Avena species that include wheat, barley, rye and oat. GrainGenes accomplishes its mission by continually enriching its cross-linked data content following the findable, accessible, interoperable and reusable principles, enhancing and maintaining an intuitive web interface, creating tools to enable easy data access and establishing data connections within and between GrainGenes and other biological databases to facilitate knowledge discovery. GrainGenes operates within the biological database community, collaborates with curators and genome sequencing groups and contributes to the AgBioData Consortium and the International Wheat Initiative through the Wheat Information System (WheatIS). Interactive and linked content is paramount for successful biological databases and GrainGenes now has 2917 manually curated gene records, including 289 genes and 254 alleles from the Wheat Gene Catalogue (WGC). There are >4.8 million gene models in 51 genome browser assemblies, 6273 quantitative trait loci and >1.4 million genetic loci on 4756 genetic and physical maps contained within 443 mapping sets, complete with standardized metadata. Most notably, 50 new genome browsers that include outputs from the Wheat and Barley PanGenome projects have been created. We provide an example of an expression quantitative trait loci track on the International Wheat Genome Sequencing Consortium Chinese Spring wheat browser to demonstrate how genome browser tracks can be adapted for different data types. To help users benefit more from its data, GrainGenes created four tutorials available on YouTube. GrainGenes is executing its vision of service by continuously responding to the needs of the global small grains community by creating a centralized, long-term, interconnected data repository. Database URL:https://wheat.pw.usda.gov.
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Registered trials
Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.