Evidence map›Paper›PMID 35615367›Full record

ArticleFrontiers in immunology2022

Clustering of End Stage Renal Disease Patients by Dimensionality Reduction Algorithms According to Lymphocyte Senescence Markers.

Georgios Lioulios, Asimina Fylaktou, Aliki Xochelli, Erasmia Sampani, Ioannis Tsouchnikas, Panagiotis Giamalis, Dimitra-Vasilia Daikidou, Vasiliki Nikolaidou, Aikaterini Papagianni, Ioannis Theodorou and 1 more

Abstract read
In one paragraph

Article in Frontiers in immunology, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 10 papers.

0numbers the graph read from it
0cells of the map it votes in
10citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

10 citing papers in PubMed.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors.

Georgios LiouliosDepartment of Nephrology Aristotle University of Thessaloniki, Hippokration Hospital, Thessaloniki, Greece.
Asimina FylaktouDepartment of Immunology, National Peripheral Histocompatibility Center, Hippokration Hospital, Thessaloniki, Greece.
Aliki XochelliDepartment of Immunology, National Peripheral Histocompatibility Center, Hippokration Hospital, Thessaloniki, Greece.
Erasmia SampaniDepartment of Nephrology Aristotle University of Thessaloniki, Hippokration Hospital, Thessaloniki, Greece.
Ioannis TsouchnikasDepartment of Nephrology Aristotle University of Thessaloniki, Hippokration Hospital, Thessaloniki, Greece.
Panagiotis GiamalisDepartment of Nephrology Aristotle University of Thessaloniki, Hippokration Hospital, Thessaloniki, Greece.
Dimitra-Vasilia DaikidouDepartment of Nephrology Aristotle University of Thessaloniki, Hippokration Hospital, Thessaloniki, Greece.
Vasiliki NikolaidouDepartment of Immunology, National Peripheral Histocompatibility Center, Hippokration Hospital, Thessaloniki, Greece.
Aikaterini PapagianniDepartment of Nephrology Aristotle University of Thessaloniki, Hippokration Hospital, Thessaloniki, Greece.
Ioannis TheodorouLaboratoire d'Immunologie, Hôpital Robert Debré, Paris, France.
Maria StangouDepartment of Nephrology Aristotle University of Thessaloniki, Hippokration Hospital, Thessaloniki, Greece.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

End stage renal disease (ESRD) engenders detrimental effects in the Immune system, manifested as quantitative alterations of lymphocyte subpopulations, akin, albeit not identical to those observed during the ageing process. We performed dimensionality reduction of an extended lymphocyte phenotype panel of senescent and exhaustion related markers in ESRD patients and controls with Principal Component Analysis (PCA) and Uniform Manifold Approximation and Projection (UMAP). The plane defined by the first two principal components of PCA showed two fuzzy clusters, for patients and controls, respectively, with loadings of non-senescent markers pointing towards the controls' centroid. Naive lymphocytes were reduced in ESRD patients compared to controls (CD4+CD45RA+CCR7+ 200(150-328)

Indexed as

Kidney Failure, ChronicAlgorithmsCluster AnalysisHumansLymphocytesRenal DialysisdialysisESRDhemodiafiltrationimmune exhaustionimmune senescencemachine learning

Identifiers

PMID35615367
PMCPMC9126282

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.