Evidence map›Paper›PMID 35614049›Full record

ArticleNature communications2022

Exact simulation of pigment-protein complexes unveils vibronic renormalization of electronic parameters in ultrafast spectroscopy.

F Caycedo-Soler, A Mattioni, J Lim, T Renger, S F Huelga, M B Plenio

Abstract read
In one paragraph

Article in Nature communications, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 13 papers.

0numbers the graph read from it
0cells of the map it votes in
13citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

13 citing papers in PubMed.

  1. Article
  2. Quantum biology: From mechanisms to medicine.Clinical and translational medicine · 2026
    Review
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors.

F Caycedo-SolerInstitute of Theoretical Physics and IQST, Ulm University, Albert-Einstein-Allee 11, 89081, Ulm, Germany.
A MattioniInstitute of Theoretical Physics and IQST, Ulm University, Albert-Einstein-Allee 11, 89081, Ulm, Germany.ORCID 0000-0001-5044-0918
J LimInstitute of Theoretical Physics and IQST, Ulm University, Albert-Einstein-Allee 11, 89081, Ulm, Germany.
T RengerInstitute of Theoretical Physics, Department of Theoretical Biophysics, Johannes Kepler University Linz, Altenberger Str. 69, 4040, Linz, Austria.ORCID 0000-0001-9245-3805
S F HuelgaInstitute of Theoretical Physics and IQST, Ulm University, Albert-Einstein-Allee 11, 89081, Ulm, Germany. susana.huelga@uni-ulm.de.ORCID 0000-0003-1277-8154
M B PlenioInstitute of Theoretical Physics and IQST, Ulm University, Albert-Einstein-Allee 11, 89081, Ulm, Germany. martin.plenio@uni-ulm.de.ORCID 0000-0003-4238-8843

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The primary steps of photosynthesis rely on the generation, transport, and trapping of excitons in pigment-protein complexes (PPCs). Generically, PPCs possess highly structured vibrational spectra, combining many discrete intra-pigment modes and a quasi-continuous of protein modes, with vibrational and electronic couplings of comparable strength. The intricacy of the resulting vibronic dynamics poses significant challenges in establishing a quantitative connection between spectroscopic data and underlying microscopic models. Here we show how to address this challenge using numerically exact simulation methods by considering two model systems, namely the water-soluble chlorophyll-binding protein of cauliflower and the special pair of bacterial reaction centers. We demonstrate that the inclusion of the full multi-mode vibronic dynamics in numerical calculations of linear spectra leads to systematic and quantitatively significant corrections to electronic parameter estimation. These multi-mode vibronic effects are shown to be relevant in the longstanding discussion regarding the origin of long-lived oscillations in multidimensional nonlinear spectra.

Indexed as

ChlorophyllLight-Harvesting Protein ComplexesElectronicsEnergy TransferProteinsSpectrum AnalysisChlorophyllLight-Harvesting Protein ComplexesProteins

Identifiers

PMID35614049
PMCPMC9133012

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.