Evidence map›Paper›PMID 35613583›Full record

ArticleCell reports2022

Transcriptional profiling of human Vδ1 T cells reveals a pathogen-driven adaptive differentiation program.

Jack L McMurray, Anouk von Borstel, Taher E Taher, Eleni Syrimi, Graham S Taylor, Maria Sharif, Jamie Rossjohn, Ester B M Remmerswaal, Frederike J Bemelman, Felipe A Vieira Braga and 10 more

Open access · goldAbstract read
In one paragraph

Article in Cell reports, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 46 papers.

0numbers the graph read from it
0cells of the map it votes in
46citing papers in PubMed
3.4field-weighted citation impact, top 6% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

46 citing papers in PubMed, 46 citations in OpenAlex.

  1. Trial
  2. Article
  3. γδ T cells and cancer.The Journal of clinical investigation · 2026
    Review
  4. T Cell Thoughts.Immunological reviews · 2026
    Review
  5. γδ T cells show distinct responses to CMV after stem cell transplantation.Journal of molecular medicine (Berlin, Germany) · 2026
    Article
  6. Article
  7. Article
  8. Article
  9. Article
  10. Review
  11. Article
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  15. Review
  16. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

20 authors at 10 institutions in 5 countries.

Jack L McMurrayInstitute of Immunology and Immunotherapy, University of Birmingham, Birmingham B15 2TT, UK.
Anouk von BorstelInfection and Immunity Program and Department of Biochemistry and Molecular Biology, Biomedicine Discovery Institute, Monash University, Clayton, VIC 3800, Australia.
Taher E TaherInstitute of Immunology and Immunotherapy, University of Birmingham, Birmingham B15 2TT, UK.
Eleni SyrimiInstitute of Immunology and Immunotherapy, University of Birmingham, Birmingham B15 2TT, UK; Department of Haematology, Birmingham Children's Hospital, Birmingham B4 6NH, UK.
Graham S TaylorInstitute of Immunology and Immunotherapy, University of Birmingham, Birmingham B15 2TT, UK.
Maria SharifInstitute of Immunology and Immunotherapy, University of Birmingham, Birmingham B15 2TT, UK.
Jamie RossjohnInfection and Immunity Program and Department of Biochemistry and Molecular Biology, Biomedicine Discovery Institute, Monash University, Clayton, VIC 3800, Australia; Institute of Infection and Immunity, Cardiff University School of Medicine, Heath Park, Cardiff CF14 4XN, UK; Australian Research Council Centre of Excellence in Advanced Molecular Imaging, Monash University, Clayton, VIC 3800, Australia.
Ester B M RemmerswaalDepartment of Experimental Immunology, Amsterdam Infection and Immunity Institute, Amsterdam UMC, University of Amsterdam, Amsterdam, the Netherlands.
Frederike J BemelmanRenal Transplant Unit, Division of Internal Medicine, Academic Medical Centre, Amsterdam UMC, University of Amsterdam, Amsterdam, the Netherlands.
Felipe A Vieira BragaWellcome Sanger Institute, Cambridge, UK.
Xi ChenWellcome Sanger Institute, Cambridge, UK.
Sarah A TeichmannWellcome Sanger Institute, Cambridge, UK; European Molecular Biology Laboratory, European Bioinformatics Institute (EMBL-EBI), Cambridge CB10 1SD, UK.
Fiyaz MohammedInstitute of Immunology and Immunotherapy, University of Birmingham, Birmingham B15 2TT, UK.
Andrea A BerryCenter for Vaccine Development and Global Health, University of Maryland School of Medicine, Baltimore, MD, USA.
Kirsten E LykeCenter for Vaccine Development and Global Health, University of Maryland School of Medicine, Baltimore, MD, USA.
Kim C WilliamsonDepartment of Microbiology and Immunology, Uniformed Services University of the Health Sciences, Bethesda, MD, USA.
Michael J T StubbingtonWellcome Sanger Institute, Cambridge, UK.
Martin S DaveyInstitute of Immunology and Immunotherapy, University of Birmingham, Birmingham B15 2TT, UK; Infection and Immunity Program and Department of Biochemistry and Molecular Biology, Biomedicine Discovery Institute, Monash University, Clayton, VIC 3800, Australia. Electronic address: martin.davey@monash.edu.
Carrie R WillcoxInstitute of Immunology and Immunotherapy, University of Birmingham, Birmingham B15 2TT, UK. Electronic address: c.r.willcox@bham.ac.uk.
Benjamin E WillcoxInstitute of Immunology and Immunotherapy, University of Birmingham, Birmingham B15 2TT, UK. Electronic address: b.willcox@bham.ac.uk.
University of Birmingham · GBWellcome Sanger Institute · GBAmsterdam University Medical Centers · NLUniversity of Maryland, Baltimore · USAustralian Regenerative Medicine Institute · AUAustralian Research Council · AUBirmingham Children's Hospital · GBDiscovery Institute · USEuropean Bioinformatics Institute · GBUniformed Services University of the Health Sciences · US

Funding

Technology CoreU19AI110820 · NIAID · UNIVERSITY OF MARYLAND BALTIMORE · PI DUNNING HOTOPP, JULIE · 2014 to 2023
$36.5M
A Systems Biology Approach to Malaria ImmunityU01AI110852 · NIAID · HENRY M. JACKSON FDN FOR THE ADV MIL/MED · PI WILLIAMSON, KIM C · 2016 to 2019
$2.8M
The impact of in utero HIV exposure on infant T and B cell responses in MalawiU01HD092308 · NICHD · UNIVERSITY OF MARYLAND BALTIMORE · PI CAIRO, CRISTIANA, LAUFER, MIRIAM K. · 2017 to 2021
$2.7M
A Systems Biology Approach to Malaria ImmunityR01AI110852 · NIAID · HENRY M. JACKSON FDN FOR THE ADV MIL/MED · PI WILLIAMSON, KIM C · 2015 to 2015
$778k
NIAID NIH HHS R01 AI110852NIAID NIH HHS U01 AI110852NIAID NIH HHS U19 AI110820NICHD NIH HHS U01 HD092308Wellcome TrustWellcome Trust 099266/Z/12/ZWellcome Trust 221725/Z/20/Z
6 · The paper itself

Abstract

γδ T cells are generally considered innate-like lymphocytes, however, an "adaptive-like" γδ compartment has now emerged. To understand transcriptional regulation of adaptive γδ T cell immunobiology, we combined single-cell transcriptomics, T cell receptor (TCR)-clonotype assignment, ATAC-seq, and immunophenotyping. We show that adult Vδ1

Indexed as

Receptors, Antigen, T-Cell, gamma-deltaT-Lymphocyte SubsetsAdultCD8-Positive T-LymphocytesCell DifferentiationChild, PreschoolGranzymesHumansGranzymesReceptors, Antigen, T-Cell, gamma-deltaadaptiveclonal expansionCP: ImmunologyCP: MicrobiologydifferentiationeffectornaivepathogenT cell receptortranscription factor

Identifiers

PMID35613583
PMCPMC9533230
OpenAlexW4281386726

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.