Evidence map›Paper›PMID 35613558›Full record

ArticleDevelopmental neuroscience2022

Novel Injury Scoring Tool for Assessing Brain Injury following Neonatal Hypoxia-Ischemia in Mice.

Burak Ozaydin, Ela Bicki, Onur E Taparli, Temour Z Sheikh, Danielle K Schmidt, Sefer Yapici, Margarett B Hackett, Nida Karahan-Keles, Jens C Eickhoff, Karson Corcoran and 7 more

Open access · greenAbstract read
In one paragraph

Article in Developmental neuroscience, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed
2.3field-weighted citation impact, top 12% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

5 citing papers in PubMed, 7 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

17 authors at 1 institution in 1 country.

Burak OzaydinDepartment of Surgery, University of Wisconsin-Madison, Madison, Wisconsin, USA.
Ela BickiDepartment of Pediatrics, University of Wisconsin-Madison, Madison, Wisconsin, USA.
Onur E TaparliDepartment of Pediatrics, University of Wisconsin-Madison, Madison, Wisconsin, USA.
Temour Z SheikhWaisman Center, University of Wisconsin-Madison, Madison, Wisconsin, USA.
Danielle K SchmidtWaisman Center, University of Wisconsin-Madison, Madison, Wisconsin, USA.
Sefer YapiciWaisman Center, University of Wisconsin-Madison, Madison, Wisconsin, USA.
Margarett B HackettWaisman Center, University of Wisconsin-Madison, Madison, Wisconsin, USA.
Nida Karahan-KelesWaisman Center, University of Wisconsin-Madison, Madison, Wisconsin, USA.
Jens C EickhoffDepartment of Biostatistics and Medical Informatics, University of Wisconsin-Madison, Madison, Wisconsin, USA.
Karson CorcoranWaisman Center, University of Wisconsin-Madison, Madison, Wisconsin, USA.
Claudia Lagoa-MiguelWaisman Center, University of Wisconsin-Madison, Madison, Wisconsin, USA.
Jose Guerrero GonzalezWaisman Center, University of Wisconsin-Madison, Madison, Wisconsin, USA.
Douglas C Dean IiiDepartment of Pediatrics, University of Wisconsin-Madison, Madison, Wisconsin, USA.
Andre M M SousaWaisman Center, University of Wisconsin-Madison, Madison, Wisconsin, USA.
Peter A FerrazzanoDepartment of Pediatrics, University of Wisconsin-Madison, Madison, Wisconsin, USA.
Jon E LevineDepartment of Neuroscience, University of Wisconsin-Madison, Madison, Wisconsin, USA.
Pelin CengizDepartment of Pediatrics, University of Wisconsin-Madison, Madison, Wisconsin, USA.
University of Wisconsin–Madison · US

Funding

U.W. RADIOLOGICAL SCIENCES TRAINING PROGRAMT32CA009206 · NCI · UNIVERSITY OF WISCONSIN-MADISON · PI Bryan Patrick Bednarz · 1985 to 2026
$12.1M
Waisman Center Intellectual and Developmental Disabilities Research CenterP50HD105353 · NICHD · UNIVERSITY OF WISCONSIN-MADISON · PI Brittany Gail Travers · 2021 to 2026
$8.5M
Collaborative Expansion of Marmoset Colonies for Neuroscience ResearchU24MH123422 · NIMH · UNIVERSITY OF WISCONSIN-MADISON · PI LEVINE, JON E, ROGERS, JEFFREY A. · 2020 to 2024
$5.1M
Neurosteroid Regulation of Adiposity, Glucose Homeostasis and Energy Expenditure in PrimatesR01DK121559 · NIDDK · UNIVERSITY OF WISCONSIN-MADISON · PI LEVINE, JON E · 2019 to 2023
$3.0M
Sex Differences in Neurotrophin Mediated Neonatal Neuroprotection: Role of ER AlphaR01NS111021 · NINDS · UNIVERSITY OF WISCONSIN-MADISON · PI CENGIZ, PELIN · 2019 to 2023
$1.7M
Estrogen receptors and TrkB mediated neuroprotection in neonatal hypoxia-ischemiaK08NS088563 · NINDS · UNIVERSITY OF WISCONSIN-MADISON · PI CENGIZ, PELIN · 2015 to 2019
$994k
Whole exome analyses in naturally occurring hyperandrogenic female monkeysR21HD102172 · NICHD · UNIVERSITY OF WISCONSIN-MADISON · PI ABBOTT, DAVID H, LEVINE, JON E · 2020 to 2021
$400k
NCI NIH HHS T32 CA009206NICHD NIH HHS P50 HD105353NICHD NIH HHS R21 HD102172NIDDK NIH HHS R01 DK121559NIMH NIH HHS U24 MH123422NINDS NIH HHS K08 NS088563NINDS NIH HHS R01 NS111021
6 · The paper itself

Abstract

The variability of severity in hypoxia-ischemia (HI)-induced brain injury among research subjects is a major challenge in developmental brain injury research. Our laboratory developed a novel injury scoring tool based on our gross pathological observations during hippocampal extraction. The hippocampi received scores of 0-6 with 0 being no injury and 6 being severe injury post-HI. The hippocampi exposed to sham surgery were grouped as having no injury. We have validated the injury scoring tool with T2-weighted MRI analysis of percent hippocampal/hemispheric tissue loss and cell survival/death markers after exposing the neonatal mice to Vannucci's rodent model of neonatal HI. In addition, we have isolated hippocampal nuclei and quantified the percent good quality nuclei to provide an example of utilization of our novel injury scoring tool. Our novel injury scores correlated significantly with percent hippocampal and hemispheric tissue loss, cell survival/death markers, and percent good quality nuclei. Caspase-3 and Poly (ADP-ribose) polymerase-1 (PARP1) have been implicated in different cell death pathways in response to neonatal HI. Another gene, sirtuin1 (SIRT1), has been demonstrated to have neuroprotective and anti-apoptotic properties. To assess the correlation between the severity of injury and genes involved in cell survival/death, we analyzed caspase-3, PARP1, and SIRT1 mRNA expressions in hippocampi 3 days post-HI and sham surgery, using quantitative reverse transcription polymerase chain reaction. The ipsilateral (IL) hippocampal caspase-3 and SIRT1 mRNA expressions post-HI were significantly higher than sham IL hippocampi and positively correlated with the novel injury scores in both males and females. We detected a statistically significant sex difference in IL hippocampal caspase-3 mRNA expression with comparable injury scores between males and females with higher expression in females.

Indexed as

Brain InjuriesHypoxia-Ischemia, BrainAnimalsAnimals, NewbornBrainCaspase 3FemaleHumansIschemiaMaleMiceRNA, MessengerSirtuin 1Caspase 3RNA, MessengerSirtuin 1ApoptosisBrain injuryCaspase-3HippocampusHypoxia-ischemiaInjury scoreMRINuclei integrityPARPSIRTSirtuin

Identifiers

PMID35613558
PMCPMC9474591
OpenAlexW4281553970

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.