Evidence map›Paper›PMID 35613319›Full record

ArticleACS chemical biology2022

Convergent Alterations of a Protein Hub Produce Divergent Effects within a Binding Site.

Ali Imran, Brandon S Moyer, Dan Kalina, Thomas M Duncan, Kelsey J Moody, Aaron J Wolfe, Michael S Cosgrove, Liviu Movileanu

Open access · hybridAbstract read
In one paragraph

Article in ACS chemical biology, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 6 papers.

0numbers the graph read from it
0cells of the map it votes in
6citing papers in PubMed
0.6field-weighted citation impact, top 36% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

6 citing papers in PubMed, 7 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 4 institutions in 1 country.

Ali ImranDepartment of Physics, Syracuse University, 201 Physics Building, Syracuse, New York 13244-1130, United States.
Brandon S MoyerIchor Life Sciences, Inc., 2651 US Route 11, LaFayette, New York 13084, United States.
Dan KalinaIchor Life Sciences, Inc., 2651 US Route 11, LaFayette, New York 13084, United States.
Thomas M DuncanDepartment of Biochemistry and Molecular Biology, State University of New York Upstate Medical University, 4249 Weiskotten Hall, 766 Irving Avenue, Syracuse, New York 13210, United States.
Kelsey J MoodyDepartment of Physics, Syracuse University, 201 Physics Building, Syracuse, New York 13244-1130, United States.
Aaron J WolfeDepartment of Physics, Syracuse University, 201 Physics Building, Syracuse, New York 13244-1130, United States.
Michael S CosgroveDepartment of Biochemistry and Molecular Biology, State University of New York Upstate Medical University, 4249 Weiskotten Hall, 766 Irving Avenue, Syracuse, New York 13210, United States.
Liviu MovileanuDepartment of Physics, Syracuse University, 201 Physics Building, Syracuse, New York 13244-1130, United States.ORCID 0000-0002-2525-3341
State University of New York · USSUNY Upstate Medical University · USSyracuse University · USIchor Life Sciences (United States)

Funding

Molecular Mechanisms for the Assembly and Regulation of the MLL1 Core ComplexR01CA140522 · NCI · UPSTATE MEDICAL UNIVERSITY · PI COSGROVE, MICHAEL S. · 2010 to 2019
$3.6M
Disentanglement of the MLL-WDR5 Protein-Protein Recognition EventsR01GM129429 · NIGMS · SYRACUSE UNIVERSITY · PI MOVILEANU, LIVIU · 2018 to 2021
$1.3M
NCI NIH HHS R01 CA140522NIGMS NIH HHS R01 GM129429
6 · The paper itself

Abstract

Progress in tumor sequencing and cancer databases has created an enormous amount of information that scientists struggle to sift through. While several research groups have created computational methods to analyze these databases, much work still remains in distinguishing key implications of pathogenic mutations. Here, we describe an approach to identify and evaluate somatic cancer mutations of WD40 repeat protein 5 (WDR5), a chromatin-associated protein hub. This multitasking protein maintains the functional integrity of large multi-subunit enzymatic complexes of the six human SET1 methyltransferases. Remarkably, the somatic cancer mutations of WDR5 preferentially distribute within and around an essential cavity, which hosts the WDR5 interaction (Win) binding site. Hence, we assessed the real-time binding kinetics of the interactions of key clustered WDR5 mutants with the Win motif peptide ligands of the SET1 family members (SET1

Indexed as

Histone-Lysine N-MethyltransferasePeptidesBinding SitesHumansIntracellular Signaling Peptides and ProteinsLigandsMultienzyme ComplexesProtein BindingHistone-Lysine N-MethyltransferaseIntracellular Signaling Peptides and ProteinsLigandsMultienzyme ComplexesPeptidesWDR5 protein, human

Identifiers

PMID35613319
PMCPMC9207812
OpenAlexW4281478523

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.