Evidence map›Paper›PMID 35613056›Full record

ArticleProceedings of the National Academy of Sciences of the United States of America2022

Structural control of fibrin bioactivity by mechanical deformation.

Sachin Kumar, Yujen Wang, Mohammadhasan Hedayati, Frederik Fleissner, Manuel K Rausch, Sapun H Parekh

Open access · greenAbstract read
In one paragraph

Article in Proceedings of the National Academy of Sciences of the United States of America, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 14 papers.

0numbers the graph read from it
0cells of the map it votes in
14citing papers in PubMed
4.6field-weighted citation impact, top 4% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

14 citing papers in PubMed, 31 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Article
  5. Deconstructing fibrin(ogen) structure.Journal of thrombosis and haemostasis : JTH · 2025
    Review
  6. Protofibril packing density of individual fibers alters fibrinolysis.Research and practice in thrombosis and haemostasis · 2025
    Article
  7. Review
  8. Collagen organization and structure inBiomedical optics express · 2024
    Article
  9. Elucidating the role of water in collagen self-assembly by isotopically modulating collagen hydration.Proceedings of the National Academy of Sciences of the United States of America · 2024
    Article
  10. Collagen organization and structure inbioRxiv : the preprint server for biology · 2024
    Article
  11. Article
  12. Review
  13. Visualizing molecular deformation in fibrin networks under tensile loadingChemical communications (Cambridge, England) · 2023
    Article
  14. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 3 institutions in 3 countries.

Sachin KumarDepartment of Biomedical Engineering, University of Texas at Austin, Austin, TX 78712.
Yujen WangDepartment of Biomedical Engineering, University of Texas at Austin, Austin, TX 78712.
Mohammadhasan HedayatiDepartment of Biomedical Engineering, University of Texas at Austin, Austin, TX 78712.ORCID 0000-0001-9494-7091
Frederik FleissnerMolecular Spectroscopy Department, Max Planck Institute for Polymer Research, Mainz 55128, Germany.
Manuel K RauschDepartment of Biomedical Engineering, University of Texas at Austin, Austin, TX 78712.
Sapun H ParekhDepartment of Biomedical Engineering, University of Texas at Austin, Austin, TX 78712.ORCID 0000-0001-8522-1854
The University of Texas at Austin · USMax Planck Institute for Polymer Research · DEAll India Institute of Medical Sciences · IN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Fibrin is the fibrous protein network that comprises blood clots; it is uniquely capable of bearing very large tensile strains (up to 200%) due to multiscale force accommodation mechanisms. Fibrin is also a biochemical scaffold for numerous enzymes and blood factors. The biomechanics and biochemistry of fibrin have been independently studied. However, comparatively little is known about how fibrin biomechanics and biochemistry are coupled: how does fibrin deformation influence its biochemistry? In this study, we show that mechanically induced protein structural changes in fibrin affect fibrin biochemistry. We find that tensile deformation of fibrin leads to molecular structural transitions of α-helices to β-sheets, which reduced binding of tissue plasminogen activator (tPA), an enzyme that initiates fibrin lysis. Moreover, binding of tPA and Thioflavin T, a commonly used β-sheet marker, were mutually exclusive, further demonstrating the mechano-chemical control of fibrin biochemistry. Finally, we demonstrate that structural changes in fibrin suppressed the biological activity of platelets on mechanically strained fibrin due to reduced αIIbβ3 integrin binding. Our work shows that mechanical strain regulates fibrin molecular structure and biological activity in an elegant mechano-chemical feedback loop, which possibly extends to other fibrous biopolymers.

Indexed as

FibrinStress, MechanicalTensile StrengthBenzothiazolesHumansProtein BindingProtein Conformation, alpha-HelicalProtein Conformation, beta-StrandTissue Plasminogen ActivatorBenzothiazolesFibrinthioflavin TTissue Plasminogen Activatorextracellular matrixfibrinmechanochemistrystructure-function

Identifiers

PMID35613056
PMCPMC9295804
OpenAlexW4281484178

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC-ND
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.