Evidence map›Paper›PMID 35611261›Full record

ArticleJAC-antimicrobial resistance2022

Comparative genomic analysis of ESBL-producing

Philippe Bidet, André Birgy, Naim Ouldali, Stéphane Béchet, Corinne Levy, Fouad Madhi, Elsa Sobral, Robert Cohen, Stéphane Bonacorsi

Open access · goldAbstract read
In one paragraph

Article in JAC-antimicrobial resistance, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 8 papers.

0numbers the graph read from it
0cells of the map it votes in
8citing papers in PubMed
1.1field-weighted citation impact, top 24% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

8 citing papers in PubMed, 5 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 4 institutions in 1 country.

Philippe BidetUniversité Paris Cité, IAME, INSERM, F-75018 Paris, France.
André BirgyUniversité Paris Cité, IAME, INSERM, F-75018 Paris, France.
Naim OuldaliAssociation Clinique Thérapeutique Infantile du Val de Marne (ACTIV), Créteil, France.
Stéphane BéchetAssociation Clinique Thérapeutique Infantile du Val de Marne (ACTIV), Créteil, France.
Corinne LevyAssociation Clinique Thérapeutique Infantile du Val de Marne (ACTIV), Créteil, France.ORCID https://orcid.org/0000-0002-1927-6360
Fouad MadhiAssociation Clinique Thérapeutique Infantile du Val de Marne (ACTIV), Créteil, France.ORCID https://orcid.org/0000-0001-6816-5272
Elsa SobralAssociation Clinique Thérapeutique Infantile du Val de Marne (ACTIV), Créteil, France.
Robert CohenAssociation Clinique Thérapeutique Infantile du Val de Marne (ACTIV), Créteil, France.
Stéphane BonacorsiUniversité Paris Cité, IAME, INSERM, F-75018 Paris, France.
Inserm · FRSociété Française de Cardiologie · FRAssociation Clinique et Thérapeutique Infantile du Val de Marne · FRAssistance Publique – Hôpitaux de Paris · FR

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Background: The reliability of ESBL-producing Objectives: To compare the genomic characteristics of ESBL-Ec isolates from faecal carriage and FUTI to assess their correlation and identify a FUTI-associated virulence profile. Methods: We conducted a prospective multicentre hospital and ambulatory-based study. We analysed the genotypes and virulence factors of both faecal and FUTI ESBL-Ec by whole genome sequencing. Correlations were assessed by non-parametric Spearman coefficient and virulence factors were assessed by chi-squared tests with Bonferroni correction. Results: We included 218 ESBL-Ec causing FUTI and 154 ESBL-Ec faecal carriage isolates. The most frequent ST was ST131 (44%) in both collections. We found high correlation between carriage and ESBL-Ec FUTI regarding genes/alleles (rho = 0.88, Conclusions: The genomic profile of ESBL-Ec causing FUTI in children strongly correlates with faecal carriage isolates except for a few genes. The presence of

Identifiers

PMID35611261
PMCPMC9123598
OpenAlexW4282944043

What OpenQuestion holds

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LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.