Evidence map›Paper›PMID 35610748›Full record

ReviewGenes to cells : devoted to molecular & cellular mechanisms2022

The structure-function analysis of Obg-like GTPase proteins along the evolutionary tree from bacteria to humans.

Asmita Chakraborty, Sheta Halder, Purvi Kishore, Disha Saha, Sujata Saha, Kunal Sikder, Arnab Basu

Open access · greenAbstract readReview
In one paragraph

Review in Genes to cells : devoted to molecular & cellular mechanisms, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 8 papers.

0numbers the graph read from it
0cells of the map it votes in
8citing papers in PubMed
2.6field-weighted citation impact, top 10% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

8 citing papers in PubMed, 14 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Regulation of RNA-binding proteins by small biomolecules.Nature reviews. Molecular cell biology · 2026
    Review
  5. Article
  6. Recent Advances in Bacterial Persistence Mechanisms.International journal of molecular sciences · 2023
    Review
  7. YbiB: a novel interactor of the GTPase ObgE.Nucleic acids research · 2023
    Article
  8. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 2 institutions in 2 countries.

Asmita ChakrabortyJIVAN, Department of Biomedical Science and Technology, School of Biological Sciences, Ramakrishna Mission Vivekananda Educational Research Institute (RKMVERI), Kolkata, India.
Sheta HalderDepartment of Biotechnology, Amity University Kolkata, Kolkata, India.
Purvi KishoreDepartment of Biotechnology, Amity University Kolkata, Kolkata, India.
Disha SahaDepartment of Biotechnology, Amity University Kolkata, Kolkata, India.
Sujata SahaJIVAN, Department of Biomedical Science and Technology, School of Biological Sciences, Ramakrishna Mission Vivekananda Educational Research Institute (RKMVERI), Kolkata, India.
Kunal SikderJIVAN, Department of Biomedical Science and Technology, School of Biological Sciences, Ramakrishna Mission Vivekananda Educational Research Institute (RKMVERI), Kolkata, India.
Arnab BasuJIVAN, Department of Biomedical Science and Technology, School of Biological Sciences, Ramakrishna Mission Vivekananda Educational Research Institute (RKMVERI), Kolkata, India.ORCID https://orcid.org/0000-0002-8048-8733
Ramakrishna Mission Vivekananda Educational and Research Institute · INAmity University · AE

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Obg proteins belong to P-loop guanine triphosphatase (GTPase) that are conserved from bacteria to humans. Like other GTPases, Obg cycles between guanine triphosphate (GTP) bound "on" state and guanine diphosphate (GDP)-bound "off" state, thereby controlling various cellular processes. Different members of this group have unique structural characteristics; a conserved glycine-rich N-terminal domain known as obg fold, a central conserved nucleotide binding domain, and a less conserved C-terminal domain of other functions. Obg is a ribosome dependent GTPase helps in ribosome maturation by interacting with several proteins of the 50S subunit of the ribosome. Obg proteins have been widely considered as a regulator of cellular functions, helping in DNA replication, cell division. Apart from that, this protein also takes part in various stress adaptation pathways like a stringent response, sporulation, and general stress response. In this particular review, the structural features of ObgE have been highlighted and how the structure plays important role in interacting with regulators like GTP, ppGpp that are crucial for executing biological function has been orchestrated. In particular, we believe that Obg-like proteins can provide a link between different global pathways that are necessary for fine-tuning cellular processes to maintain the cellular energy status.

Indexed as

BacteriaGTP PhosphohydrolasesAmino Acid SequenceBacterial ProteinsGuanineGuanosine TriphosphateHumansBacterial ProteinsGTP PhosphohydrolasesGuanineGuanosine TriphosphateGTPObgppGppribosomeTRAFAC GTPase

Identifiers

PMID35610748
PMCPMC9545696
OpenAlexW4281478463

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC-ND
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.