ArticleScientific data2022
Chromosome-scale genome assembly of an important medicinal plant honeysuckle.
Article in Scientific data, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 7 papers.
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The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.
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Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.
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Who cites it
7 citing papers in PubMed.
- Genomic contraction of theHorticulture research · 2026Article
- Discovery of iridoid cyclase completes the iridoid pathway in asterids.Nature plants · 2025Article
- LoniComp: a platform for gene function comparison and analysis between Lonicera japonica and Lonicera macranthoides.BMC genomics · 2025Article
- Identification and complete genome sequence of honeysuckle-associated cytorhabdovirus in China.Archives of virology · 2025Article
- Efficacy of botanical lozenges in the treatment of chronic pharyngitis: a randomized controlled trial.Frontiers in pharmacology · 2024Article
- AFrontiers in plant science · 2024Article
- Whole-Genome Sequence, Assembly and Annotation of an Invasive Plant,Plants (Basel, Switzerland) · 2022Article
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Authors and funding
7 authors.
Funding
Abstract
Lonicera japonica (honeysuckle) is one of the most important medicinal plants and widely utilized in traditional Chinese medicine. At present, there are many varieties of honeysuckle used in cultivation, among which Sijihua variety are widely cultivated due to its wide adaptability, stress resistance, early flowering and high yield. In this study, we assembled the genome of Sijihua, which was approximately 886.04 Mb in size with a scaffold N50 of 79.5 Mb. 93.28% of the total assembled sequences were anchored to 9 pseudo-chromosomes by using PacBio long reads and Hi-C sequencing data. We predicted 39,320 protein-coding genes and 92.87% of them could be annotated in NR, GO, KOG, KEGG and other databases. In addition, we identified 644 tRNAs, 2,156 rRNAs, 109 miRNAs and 5,502 pseudogenes from the genome. The chromosome-scale genome of Sijihua will be a significant resource for understanding the genetic basis of high stress-resistance, which will facilitate further study of the genetic diversity and accelerate the genetic improvement and breeding of L. japonica.
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