Evidence map›Paper›PMID 35608920›Full record

ArticleJCI insight2022

Fatal COVID-19 outcomes are associated with an antibody response targeting epitopes shared with endemic coronaviruses.

Anna L McNaughton, Robert S Paton, Matthew Edmans, Jonathan Youngs, Judith Wellens, Prabhjeet Phalora, Alex Fyfe, Sandra Belij-Rammerstorfer, Jai S Bolton, Jonathan Ball and 47 more

Open access · goldAbstract read
In one paragraph

Article in JCI insight, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 32 papers.

0numbers the graph read from it
0cells of the map it votes in
32citing papers in PubMed
3.7field-weighted citation impact, top 5% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

32 citing papers in PubMed, 45 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

57 authors at 20 institutions in 6 countries.

Anna L McNaughtonPeter Medawar Building for Pathogen Research.
Robert S PatonPeter Medawar Building for Pathogen Research.
Matthew EdmansPeter Medawar Building for Pathogen Research.
Jonathan YoungsInstitute of Infection & Immunity, St George's University of London, London, United Kingdom.
Judith WellensPeter Medawar Building for Pathogen Research.
Prabhjeet PhaloraPeter Medawar Building for Pathogen Research.
Alex FyfePeter Medawar Building for Pathogen Research.
Sandra Belij-RammerstorferThe Jenner Institute Laboratories, University of Oxford, Oxford, United Kingdom.
Jai S BoltonPeter Medawar Building for Pathogen Research.
Jonathan BallGeneral Intensive Care service, St George's University Hospital National Health Service (NHS) Trust, London, United Kingdom.
George W CarnellDepartment of Veterinary Medicine, University of Cambridge, Cambridge, United Kingdom.
Wanwisa DejnirattisaiWellcome Centre for Human Genetics, Nuffield Department of Medicine.
Christina DoldOxford Vaccine Group, Department of Paediatrics, and.
David W EyreNuffield Department of Population Health, University of Oxford, Oxford, United Kingdom.
Philip HopkinsCentre for Human & Applied Physiological Sciences, School of Basic & Medical Biosciences, Faculty of Life Sciences & Medicine, King's College, London, United Kingdom.
Alison HowarthDepartment of Microbiology/Infectious Diseases, Oxford University Hospitals NHS Foundation Trust, John Radcliffe Hospital, Oxford, United Kingdom.
Kreepa KooblallOxford Centre for Diabetes, Endocrinology and Metabolism, Churchill Hospital, and.
Hannah KlimPeter Medawar Building for Pathogen Research.
Susannah LeaverGeneral Intensive Care service, St George's University Hospital National Health Service (NHS) Trust, London, United Kingdom.
Lian Ni LeePeter Medawar Building for Pathogen Research.
César López-CamachoWellcome Centre for Human Genetics, Nuffield Department of Medicine.
Sheila F LumleyPeter Medawar Building for Pathogen Research.
Derek C MacallanInstitute of Infection & Immunity, St George's University of London, London, United Kingdom.
Alexander J MentzerWellcome Centre for Human Genetics, Nuffield Department of Medicine.
Nicholas M ProvineTranslational Gastroenterology Unit, Experimental Medicine Division, Nuffield Department of Medicine, John Radcliffe Hospital, Oxford, United Kingdom.
Jeremy RatcliffPeter Medawar Building for Pathogen Research.
Jose Slon-ComposWellcome Centre for Human Genetics, Nuffield Department of Medicine.
Donal SkellyPeter Medawar Building for Pathogen Research.
Lucas StolleDepartment of Biochemistry, University of Oxford, Oxford, United Kingdom.
Piyada SupasaWellcome Centre for Human Genetics, Nuffield Department of Medicine.
Nigel TempertonViral Pseudotype Unit, Medway School of Pharmacy, University of Kent, Chatham, United Kingdom.
Chris WalkerMeso Scale Diagnostics, Rockville, Maryland, USA.
Beibei WangWellcome Centre for Human Genetics, Nuffield Department of Medicine.
Duncan WyncollIntensive Care Medicine, Guy's and St Thomas' Hospital NHS Foundation Trust, London, United Kingdom.
Oxford Protective T Cell Immunology for COVID-19 (OPTIC) consortium
Scottish National Blood Transfusion Service (SNBTS) consortium
Peter SimmondsPeter Medawar Building for Pathogen Research.
Teresa LambeThe Jenner Institute Laboratories, University of Oxford, Oxford, United Kingdom.
John Kenneth BaillieRoslin Institute, University of Edinburgh, Edinburgh, United Kingdom.
Malcolm G SempleNIHR Health Protection Research Unit in Emerging and Zoonotic Infections, Institute of Infection, Veterinary and Ecological Sciences, Faculty of Health and Life Sciences, University of Liverpool, Liverpool, United Kingdom.
Peter Jm OpenshawNational Heart and Lung Institute, Imperial College, London, United Kingdom.
International Severe Acute Respiratory and emerging Infection Consortium Coronavirus Clinical Characterisation Consortium (ISARIC4C) investigators
Uri ObolskiSchool of Public Health, Faculty of Medicine, and.
Marc TurnerNational Microbiology Reference Unit, Scottish National Blood Transfusion Service, Edinburgh, United Kingdom.
Miles CarrollWellcome Centre for Human Genetics, Nuffield Department of Medicine.
Juthathip MongkolsapayaWellcome Centre for Human Genetics, Nuffield Department of Medicine.
Gavin ScreatonWellcome Centre for Human Genetics, Nuffield Department of Medicine.
Stephen H KennedyNuffield Department of Women's & Reproductive Health, University of Oxford, John Radcliffe Hospital, Oxford, United Kingdom.
Lisa JarvisNational Microbiology Reference Unit, Scottish National Blood Transfusion Service, Edinburgh, United Kingdom.
Eleanor BarnesPeter Medawar Building for Pathogen Research.
Susanna DunachiePeter Medawar Building for Pathogen Research.
José LourençoPeter Medawar Building for Pathogen Research.
Philippa C MatthewsPeter Medawar Building for Pathogen Research.
Tihana BicanicInstitute of Infection & Immunity, St George's University of London, London, United Kingdom.
Paul KlenermanPeter Medawar Building for Pathogen Research.
Sunetra GuptaPeter Medawar Building for Pathogen Research.
Craig P ThompsonPeter Medawar Building for Pathogen Research.
University of Oxford · GBCentre for Human Genetics · GBJohn Radcliffe Hospital · GBMedawar Building for Pathogen Research · GBSt George's, University of London · GBNational Health Service · GBScottish National Blood Transfusion Service · GBChurchill Hospital · GBImperial College London · GBInstitut de Recherche Vaccinale · FRKing's College London · GBMedway School of Pharmacy · GBMeso Scale Discovery (United States) · USRoslin Institute · GBSiriraj Hospital · THSt Thomas' Hospital · GBTel Aviv University · ILUniversity of Cambridge · GBUniversity of Liverpool · GBUniversity of Warwick · GB

Funding

Biotechnology and Biological Sciences Research Council BB/M011224/1Medical Research Council MC_PC_19025Medical Research Council MC_PC_19059
6 · The paper itself

Abstract

The role of immune responses to previously seen endemic coronavirus epitopes in severe acute respiratory coronavirus 2 (SARS-CoV-2) infection and disease progression has not yet been determined. Here, we show that a key characteristic of fatal outcomes with coronavirus disease 2019 (COVID-19) is that the immune response to the SARS-CoV-2 spike protein is enriched for antibodies directed against epitopes shared with endemic beta-coronaviruses and has a lower proportion of antibodies targeting the more protective variable regions of the spike. The magnitude of antibody responses to the SARS-CoV-2 full-length spike protein, its domains and subunits, and the SARS-CoV-2 nucleocapsid also correlated strongly with responses to the endemic beta-coronavirus spike proteins in individuals admitted to an intensive care unit (ICU) with fatal COVID-19 outcomes, but not in individuals with nonfatal outcomes. This correlation was found to be due to the antibody response directed at the S2 subunit of the SARS-CoV-2 spike protein, which has the highest degree of conservation between the beta-coronavirus spike proteins. Intriguingly, antibody responses to the less cross-reactive SARS-CoV-2 nucleocapsid were not significantly different in individuals who were admitted to an ICU with fatal and nonfatal outcomes, suggesting an antibody profile in individuals with fatal outcomes consistent with an "original antigenic sin" type response.

Indexed as

COVID-19Spike Glycoprotein, CoronavirusAntibodies, ViralAntibody FormationEpitopesHumansSARS-CoV-2Antibodies, ViralEpitopesSpike Glycoprotein, Coronavirusspike protein, SARS-CoV-2Adaptive immunityImmunologyImprintingInfectious disease

Identifiers

PMID35608920
PMCPMC9310533
OpenAlexW4282914372

What OpenQuestion holds

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LicenceCC BY
Read underepoch 390

Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.