Evidence map›Paper›PMID 35608836›Full record

ArticleJournal of experimental botany2022

The importance of the urea cycle and its relationships to polyamine metabolism during ammonium stress in Medicago truncatula.

Marina Urra, Javier Buezo, Beatriz Royo, Alfonso Cornejo, Pedro López-Gómez, Daniel Cerdán, Raquel Esteban, Víctor Martínez-Merino, Yolanda Gogorcena, Paraskevi Tavladoraki and 1 more

Open access · hybridAbstract read
In one paragraph

Article in Journal of experimental botany, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 10 papers.

0numbers the graph read from it
0cells of the map it votes in
10citing papers in PubMed
5.3field-weighted citation impact, top 5% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

10 citing papers in PubMed, 28 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors at 4 institutions in 2 countries.

Marina UrraInstitute for Multidisciplinary Research in Applied Biology (IMAB), Department of Sciences, Public University of Navarre (UPNA), Avda. de Pamplona 123, 31192 Mutilva, Spain.
Javier BuezoInstitute for Multidisciplinary Research in Applied Biology (IMAB), Department of Sciences, Public University of Navarre (UPNA), Avda. de Pamplona 123, 31192 Mutilva, Spain.
Beatriz RoyoInstitute for Multidisciplinary Research in Applied Biology (IMAB), Department of Sciences, Public University of Navarre (UPNA), Avda. de Pamplona 123, 31192 Mutilva, Spain.
Alfonso CornejoInstitute for Advanced Materials and Mathematics (INAMAT2), Department of Sciences, Public University of Navarre (UPNA), Campus de Arrosadía, 31006 Pamplona, Spain.
Pedro López-GómezInstitute for Multidisciplinary Research in Applied Biology (IMAB), Department of Sciences, Public University of Navarre (UPNA), Avda. de Pamplona 123, 31192 Mutilva, Spain.
Daniel CerdánInstitute for Multidisciplinary Research in Applied Biology (IMAB), Department of Sciences, Public University of Navarre (UPNA), Avda. de Pamplona 123, 31192 Mutilva, Spain.
Raquel EstebanDepartment of Plant Biology and Ecology, University of the Basque Country (UPV/EHU), Sarriena s/n, Apdo. 644, 48080 Bilbao, Spain.
Víctor Martínez-MerinoInstitute for Advanced Materials and Mathematics (INAMAT2), Department of Sciences, Public University of Navarre (UPNA), Campus de Arrosadía, 31006 Pamplona, Spain.
Yolanda GogorcenaDepartment of Pomology, Aula Dei Experimental Station, Consejo Superior de Investigaciones Científicas (CSIC), Avda. de Montañana 1005, 50059 Zaragoza, Spain.
Paraskevi TavladorakiDepartment of Science, University Roma Tre, 00146 Rome, Italy.
Jose Fernando MoranInstitute for Multidisciplinary Research in Applied Biology (IMAB), Department of Sciences, Public University of Navarre (UPNA), Avda. de Pamplona 123, 31192 Mutilva, Spain.ORCID 0000-0001-6621-6961
Universidad Publica de Navarra · ESConsejo Superior de Investigaciones Científicas · ESRoma Tre University · ITUniversity of the Basque Country · ES

Funding

Basque Government, Spain IT-1018-16Government of Aragón, Spain Group A09-20RGovernment of Navarre, SpainItalian Ministry of Education, University and ResearchPublic University of NavarraPublic University of Navarre, SpainSpanish Government AGL2014-52396-PSpanish State Research Agency AGL2017-83358-R
6 · The paper itself

Abstract

The ornithine-urea cycle (urea cycle) makes a significant contribution to the metabolic responses of lower photosynthetic eukaryotes to episodes of high nitrogen availability. In this study, we compared the role of the plant urea cycle and its relationships to polyamine metabolism in ammonium-fed and nitrate-fed Medicago truncatula plants. High ammonium resulted in the accumulation of ammonium and pathway intermediates, particularly glutamine, arginine, ornithine, and putrescine. Arginine decarboxylase activity was decreased in roots, suggesting that the ornithine decarboxylase-dependent production of putrescine was important in situations of ammonium stress. The activity of copper amine oxidase, which releases ammonium from putrescine, was significantly decreased in both shoots and roots. In addition, physiological concentrations of ammonium inhibited copper amine oxidase activity in in vitro assays, supporting the conclusion that high ammonium accumulation favors putrescine synthesis. Moreover, early supplementation of plants with putrescine avoided ammonium toxicity. The levels of transcripts encoding urea-cycle-related proteins were increased and transcripts involved in polyamine catabolism were decreased under high ammonium concentrations. We conclude that the urea cycle and associated polyamine metabolism function as important protective mechanisms limiting ammonium toxicity in M. truncatula. These findings demonstrate the relevance of the urea cycle to polyamine metabolism in higher plants.

Indexed as

Amine Oxidase (Copper-Containing)Ammonium CompoundsMedicago truncatulaOrnithinePolyaminesPutrescineSpermidineUreaAmine Oxidase (Copper-Containing)Ammonium CompoundsOrnithinePolyaminesPutrescineSpermidineUreaAmine oxidaseammonium stressnitrogen nutritionpolyamineputrescineurea cycle

Identifiers

PMID35608836
PMCPMC9467648
OpenAlexW4281388028

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.