Evidence map›Paper›PMID 35606606›Full record

ArticleParasitology research2022

A novel RFLP method for identification of morphologically similar avian Sarcocystis species.

Donatas Sneideris, Monika Stalpes, Dalius Butkauskas, Petras Prakas

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Article in Parasitology research, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
0.5field-weighted citation impact, top 41% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed, 3 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 1 institution in 1 country.

Donatas SneiderisNature Research Centre, Akademijos Str. 2, 08412, Vilnius LT, Lithuania. donatas.sneideris@gmail.com.ORCID http://orcid.org/0000-0002-7559-9316
Monika StalpesNature Research Centre, Akademijos Str. 2, 08412, Vilnius LT, Lithuania.
Dalius ButkauskasNature Research Centre, Akademijos Str. 2, 08412, Vilnius LT, Lithuania.
Petras PrakasNature Research Centre, Akademijos Str. 2, 08412, Vilnius LT, Lithuania.ORCID http://orcid.org/0000-0002-5115-2659
Nature Research Centre · LT

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Protozoans of genus Sarcocystis are widespread parasites infecting mammals, birds, and reptiles. Morphology of their sarcocysts is an important criterion for species identification. However, as more and more morphologically similar Sarcocystis species are being found and described, additional methods for their routine diagnostics are needed. We investigated restriction fragment length polymorphism (RFLP) as potential alternative to sequencing data analysis for the identification of Sarcocystis species using birds as an intermediate host. The internal transcribed spacer 1 (ITS1) region sequences of seventeen Sarcocystis species (S. albifronsi, S. anasi, S. calchasi, S. columbae, S. cornixi, S. corvusi, S. cristata, S. halieti, S. falcatula, S. fulicae, S. kutkienae, S. lari, S. lindsayi, S. rileyi, S. turdusi, S.wenzeli, and S. wobeseri) of interest were analysed and five best-fitting endonucleases generating most informative restriction fragments were selected for routine testing. In general, RFLP analyses are always inconclusive as they target very short DNA sequences. However, it can be an irreplaceable technique when fast and cheap identification and discrimination of known species are required, which was our main goal and preliminary results indicate that RFLP could be successfully used when identifying closely related avian Sarcocystis species with just two nucleases.

Indexed as

Bird DiseasesSarcocystisSarcocystosisAnimalsBirdsMammalsPhylogenyPolymorphism, Restriction Fragment LengthRNA, Ribosomal, 18SRNA, Ribosomal, 18SBirdsITS1Molecular identificationRFLPSarcocystis

Identifiers

PMID35606606
OpenAlexW4281393361

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.