Evidence map›Paper›PMID 35604893›Full record

ArticlePLoS genetics2022

PRC1 chromatin factors strengthen the consistency of neuronal cell fate specification and maintenance in C. elegans.

Guillaume Bordet, Carole Couillault, Fabien Soulavie, Konstantina Filippopoulou, Vincent Bertrand

Open access · goldAbstract read
In one paragraph

Article in PLoS genetics, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 9 papers.

0numbers the graph read from it
0cells of the map it votes in
9citing papers in PubMed
0.9field-weighted citation impact, top 32% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

9 citing papers in PubMed, 10 citations in OpenAlex.

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  5. Epigenetics and the timing of neuronal differentiation.Current opinion in neurobiology · 2024
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 1 institution in 1 country.

Guillaume BordetAix Marseille Univ, CNRS, IBDM, Turing Center for Living Systems, Marseille, France.ORCID 0000-0002-1346-0984
Carole CouillaultAix Marseille Univ, CNRS, IBDM, Turing Center for Living Systems, Marseille, France.ORCID 0000-0002-3162-1737
Fabien SoulavieAix Marseille Univ, CNRS, IBDM, Turing Center for Living Systems, Marseille, France.ORCID 0000-0001-5359-4058
Konstantina FilippopoulouAix Marseille Univ, CNRS, IBDM, Turing Center for Living Systems, Marseille, France.ORCID 0000-0001-6356-1348
Vincent BertrandAix Marseille Univ, CNRS, IBDM, Turing Center for Living Systems, Marseille, France.ORCID 0000-0002-9036-2544
Centre National de la Recherche Scientifique · FR

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

In the nervous system, the specific identity of a neuron is established and maintained by terminal selector transcription factors that directly activate large batteries of terminal differentiation genes and positively regulate their own expression via feedback loops. However, how this is achieved in a reliable manner despite noise in gene expression, genetic variability or environmental perturbations remains poorly understood. We addressed this question using the AIY cholinergic interneurons of C. elegans, whose specification and differentiation network is well characterized. Via a genetic screen, we found that a loss of function of PRC1 chromatin factors induces a stochastic loss of AIY differentiated state in a small proportion of the population. PRC1 factors act directly in the AIY neuron and independently of PRC2 factors. By quantifying mRNA and protein levels of terminal selector transcription factors in single neurons, using smFISH and CRISPR tagging, we observed that, in PRC1 mutants, terminal selector expression is still initiated during embryonic development but the level is reduced, and expression is subsequently lost in a stochastic manner during maintenance phase in part of the population. We also observed variability in the level of expression of terminal selectors in wild type animals and, using correlation analysis, established that this noise comes from both intrinsic and extrinsic sources. Finally, we found that PRC1 factors increase the resistance of AIY neuron fate to environmental stress, and also secure the terminal differentiation of other neuron types. We propose that PRC1 factors contribute to the consistency of neuronal cell fate specification and maintenance by protecting neurons against noise and perturbations in their differentiation program.

Indexed as

Caenorhabditis elegansCaenorhabditis elegans ProteinsAnimalsCell DifferentiationChromatinGene Expression Regulation, DevelopmentalNeuronsTranscription FactorsCaenorhabditis elegans ProteinsChromatinTranscription Factors

Identifiers

PMID35604893
PMCPMC9126393
OpenAlexW4281384886

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.