Evidence map›Paper›PMID 35604417›Full record

ArticleArchives of toxicology2022

Anti-epileptic Kunitz-like peptides discovered in the branching coral Acropora digitifera through transcriptomic analysis.

Hanbin Chen, Shirley Weng In Siu, Clarence Tsun Ting Wong, Jianwen Qiu, Alex Kwok-Kuen Cheung, Simon Ming Yuen Lee

Abstract read
PubMed Publisher
In one paragraph

Article in Archives of toxicology, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 6 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
6citing papers in PubMed, 1 pooled it
1.5field-weighted citation impact, top 18% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

6 citing papers in PubMed, 1 synthesis or guideline pooled it, 9 citations in OpenAlex.

  1. Pooled it
  2. Review
  3. Review
  4. Article
  5. Article
  6. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 4 institutions in 3 countries.

Hanbin ChenState Key Laboratory of Quality Research in Chinese Medicine and Institute of Chinese Medical Sciences, University of Macau, Macao, China.
Shirley Weng In SiuInstitute of Science and Environment, University of Saint Joseph, Macao, China.
Clarence Tsun Ting WongDepartment of Applied Biology and Chemical Technology, The Hong Kong Polytechnic University, Hong Kong, China.
Jianwen QiuDepartment of Biology and Hong Kong Branch of the Southern Marine Science and Engineering Guangdong Laboratory (Guangzhou), Hong Kong Baptist University, Hong Kong, China.
Alex Kwok-Kuen CheungDepartment of Rehabilitation Sciences, The Hong Kong Polytechnic University, Hong Kong, China. alexkk.cheung@polyu.edu.hk.
Simon Ming Yuen LeeState Key Laboratory of Quality Research in Chinese Medicine and Institute of Chinese Medical Sciences, University of Macau, Macao, China. simonlee@um.edu.mo.ORCID 0000-0002-3966-6569
Hong Kong Polytechnic University · HKHong Kong Baptist University · HKUniversity of Macau · MOUniversity of Saint Joseph · CN

Funding

Key Special Project for Introduced Talents Team of Southern Marine Science and Engineering Guangdong laboratory (Guangzhou) GMl2019ZD0404Key Special Project for Introduced Talents Team of Southern Marine Science and Engineering Guangdong laboratory (Guangzhou) SMSEGl20SC02Shenzhen-Hong Kong-Macao Science and Technology Innovation Project (Category C) EF038/ICMS-LMY/2021/SZSTICThe Environmental and Conservation Fund of Hong Kong 34/2019The Hong Kong Polytechnic University P0006304The Science and Technology Development Fund (FDCT) of Macau SAR 0016/2019/AKPThe Science and Technology Development Fund (FDCT) of Macau SAR 0058/2019/A1University of Macau CPG2022-00023-ICMSUniversity of Macau MYRG2020-00183-ICMSUniversity of Macau MYRG2022-00263-ICMS
6 · The paper itself

Abstract

Approximately 50 million people are suffering from epilepsy worldwide. Corals have been used for treating epilepsy in traditional Chinese medicine, but the mechanism of this treatment is unknown. In this study, we analyzed the transcriptome of the branching coral Acropora digitifera and obtained its Kyoto Encyclopedia of Genes and Genomes (KEGG), EuKaryotic Orthologous Groups (KOG) and Gene Ontology (GO) annotation. Combined with multiple sequence alignment and phylogenetic analysis, we discovered three polypeptides, we named them AdKuz1, AdKuz2 and AdKuz3, from A. digitifera that showed a close relationship to Kunitz-type peptides. Molecular docking and molecular dynamics simulation indicated that AdKuz1 to 3 could interact with GABA

Indexed as

AnthozoaAnimalsAnticonvulsantsgamma-Aminobutyric AcidGlutamatesHumansMolecular Docking SimulationPentylenetetrazolePeptidesPhylogenyReceptors, GABA-ATranscriptomeZebrafishAnticonvulsantsgamma-Aminobutyric AcidGlutamatesPentylenetetrazolePeptidesReceptors, GABA-AAnti-epilepticGABAAKunitz peptideTranscriptome

Identifiers

PMID35604417
OpenAlexW4281399214

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.