Evidence map›Paper›PMID 35604206›Full record

ArticleMicrobiology spectrum2022

Occurrence and Genomic Characterization of Clone ST1193 Clonotype 14-64 in Uncomplicated Urinary Tract Infections Caused by Escherichia coli in Spain.

Isidro García-Meniño, Pilar Lumbreras, Luz Lestón, Mónica Álvarez-Álvarez, Vanesa García, Jens Andre Hammerl, Javier Fernández, Azucena Mora

Open access · goldAbstract readMulticenter Study
In one paragraph

Article in Microbiology spectrum, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 16 papers.

0numbers the graph read from it
0cells of the map it votes in
16citing papers in PubMed
2.8field-weighted citation impact, top 9% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

16 citing papers in PubMed, 20 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Article
  5. Article
  6. Article
  7. Review
  8. Article
  9. Article
  10. Dominance ofMicrobial genomics · 2023
    Article
  11. Article
  12. Article
  13. Comparative genomic analysis of uropathogenicFrontiers in microbiology · 2023
    Article
  14. Review
  15. Article
  16. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 4 institutions in 2 countries.

Isidro García-MeniñoLaboratorio de Referencia de Escherichia coli (LREC), Dpto. de Microbioloxía e Parasitoloxía, Universidade de Santiago de Compostela (USC), Lugo, Spain.
Pilar LumbrerasServicio de Microbiología, Hospital Universitario Central de Asturias (HUCA), Oviedo, Spain.
Luz LestónLaboratorio de Referencia de Escherichia coli (LREC), Dpto. de Microbioloxía e Parasitoloxía, Universidade de Santiago de Compostela (USC), Lugo, Spain.
Mónica Álvarez-ÁlvarezServicio de Microbiología, Hospital Universitario Central de Asturias (HUCA), Oviedo, Spain.
Vanesa GarcíaLaboratorio de Referencia de Escherichia coli (LREC), Dpto. de Microbioloxía e Parasitoloxía, Universidade de Santiago de Compostela (USC), Lugo, Spain.
Jens Andre HammerlDepartment for Biological Safety, German Federal Institute for Risk Assessment, Berlin, Germany.ORCID 0000-0002-6930-4358
Javier Fernández *Servicio de Microbiología, Hospital Universitario Central de Asturias (HUCA), Oviedo, Spain.ORCID 0000-0002-7081-0936
Azucena Mora *Laboratorio de Referencia de Escherichia coli (LREC), Dpto. de Microbioloxía e Parasitoloxía, Universidade de Santiago de Compostela (USC), Lugo, Spain.ORCID 0000-0002-0785-5795
Universidade de Santiago de Compostela · ESHospital Universitario Central de Asturias · ESFederal Institute for Risk Assessment · DEInstituto de Salud Carlos III · ES

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

We conducted a prospective, multicenter, specific pilot study on uncomplicated urinary tract infections (uUTI). One-hundred non-duplicated uropathogenic Escherichia coli (UPEC) from uUTI occurred in 2020 in women attending 15 primary care centers of a single health region of northern Spain were characterized using a clonal diagnosis approach. Among the high genetic diversity showed by 59 different phylogroup-clonotype combinations, 11 clones accounted for 46% of the isolates: B2-ST73 (CH24-30); B2-ST73 (CH24-103); B2-ST131 (CH40-30); B2-ST141 (CH52-5); B2-ST372 (CH103-9); B2-ST404 (CH14-27); B2-ST404 (CH14-807); B2-ST1193 (CH14-64); D-ST69 (CH35-27); D-ST349 (CH36-54), and F-ST59 (CH32-41). The screening of the UPEC status found that 69% of isolates carried ≥ 3 of

Indexed as

Escherichia coli InfectionsUrinary Tract InfectionsUropathogenic Escherichia coliAnti-Bacterial Agentsbeta-LactamasesClone CellsFemaleFluoroquinolonesGenomicsHumansPilot ProjectsProspective StudiesSpainAnti-Bacterial Agentsbeta-LactamasesFluoroquinolonesantimicrobial resistance (AMR)Escherichia colifluoroquinolone resistance (FQR)ST1193ST131uncomplicated UTI (uUTI)UPEC

Identifiers

PMID35604206
PMCPMC9241898
OpenAlexW4281296993

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.