Evidence map›Paper›PMID 35600903›Full record

ArticleBiological imaging2022

Kamal L Nahas, João Ferreira Fernandes, Nina Vyas, Colin Crump, Stephen Graham, Maria Harkiolaki

Abstract read
In one paragraph

Article in Biological imaging, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 6 papers.

0numbers the graph read from it
0cells of the map it votes in
6citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

6 citing papers in PubMed.

  1. Article
  2. Article
  3. 3D surface reconstruction of cellular cryo-soft X-ray microscopy tomograms using semisupervised deep learning.Proceedings of the National Academy of Sciences of the United States of America · 2023
    Article
  4. Article
  5. Article
  6. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors.

Kamal L NahasDepartment of Pathology, University of Cambridge, Tennis Court Road, Cambridge CB2 1QP, United Kingdom.ORCID https://orcid.org/0000-0003-3501-8473
João Ferreira FernandesMRC Human Immunology Unit, John Radcliffe Hospital, University of Oxford, Oxford OX3 9DS, United Kingdom.ORCID https://orcid.org/0000-0002-8161-6709
Nina VyasBeamline B24, Diamond Light Source, Harwell Science and Innovation Campus, Didcot OX11 0DE, United Kingdom.
Colin CrumpDepartment of Pathology, University of Cambridge, Tennis Court Road, Cambridge CB2 1QP, United Kingdom.ORCID https://orcid.org/0000-0001-9918-9998
Stephen GrahamDepartment of Pathology, University of Cambridge, Tennis Court Road, Cambridge CB2 1QP, United Kingdom.ORCID https://orcid.org/0000-0003-4547-4034
Maria HarkiolakiBeamline B24, Diamond Light Source, Harwell Science and Innovation Campus, Didcot OX11 0DE, United Kingdom.ORCID https://orcid.org/0000-0001-8091-9057

Funding

Biotechnology and Biological Sciences Research Council BB/M021424/1Wellcome Trust 098406
6 · The paper itself

Abstract

Cryo-soft-X-ray tomography is being increasingly used in biological research to study the morphology of cellular compartments and how they change in response to different stimuli, such as viral infections. Segmentation of these compartments is limited by time-consuming manual tools or machine learning algorithms that require extensive time and effort to train. Here we describe

Indexed as

3D imagingcryoSXTmicroscopyquantitationsegmentation

Identifiers

PMID35600903
PMCPMC7612748

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.