Evidence map›Paper›PMID 35600339›Full record

ArticleFrontiers in oncology2022

Cancer-Associated Fibroblasts and Squamous Epithelial Cells Constitute a Unique Microenvironment in a Mouse Model of Inflammation-Induced Colon Cancer.

Paige N Vega, Avlant Nilsson, Manu P Kumar, Hiroaki Niitsu, Alan J Simmons, James Ro, Jiawei Wang, Zhengyi Chen, Brian A Joughin, Wei Li and 7 more

Open access · goldAbstract read
In one paragraph

Article in Frontiers in oncology, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 17 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
17citing papers in PubMed, 1 pooled it
1.6field-weighted citation impact, top 16% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

17 citing papers in PubMed, 1 synthesis or guideline pooled it, 21 citations in OpenAlex.

  1. Pooled it
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

17 authors at 3 institutions in 2 countries.

Paige N VegaDepartment of Cell and Developmental Biology and Program in Developmental Biology, Vanderbilt University, Nashville, TN, United States.
Avlant NilssonDepartment of Biological Engineering and Koch Institute for Integrative Cancer Research, Massachusetts Institute of Technology, Cambridge, MA, United States.
Manu P KumarDepartment of Biological Engineering and Koch Institute for Integrative Cancer Research, Massachusetts Institute of Technology, Cambridge, MA, United States.
Hiroaki NiitsuEpithelial Biology Center, Vanderbilt University Medical Center, Nashville, TN, United States.
Alan J SimmonsDepartment of Cell and Developmental Biology and Program in Developmental Biology, Vanderbilt University, Nashville, TN, United States.
James RoDepartment of Cell and Developmental Biology and Program in Developmental Biology, Vanderbilt University, Nashville, TN, United States.
Jiawei WangDepartment of Cell and Developmental Biology and Program in Developmental Biology, Vanderbilt University, Nashville, TN, United States.
Zhengyi ChenDepartment of Cell and Developmental Biology and Program in Developmental Biology, Vanderbilt University, Nashville, TN, United States.
Brian A JoughinDepartment of Biological Engineering and Koch Institute for Integrative Cancer Research, Massachusetts Institute of Technology, Cambridge, MA, United States.
Wei LiEpithelial Biology Center, Vanderbilt University Medical Center, Nashville, TN, United States.
Eliot T McKinleyDepartment of Cell and Developmental Biology and Program in Developmental Biology, Vanderbilt University, Nashville, TN, United States.
Qi LiuDepartment of Biostatistics and Center for Quantitative Sciences, Vanderbilt University Medical Center, Nashville, TN, United States.
Joseph T RolandEpithelial Biology Center, Vanderbilt University Medical Center, Nashville, TN, United States.
M Kay WashingtonDepartment of Pathology, Microbiology, and Immunology, Vanderbilt University Medical Center, Nashville, TN, United States.
Robert J CoffeyDepartment of Cell and Developmental Biology and Program in Developmental Biology, Vanderbilt University, Nashville, TN, United States.
Douglas A LauffenburgerDepartment of Biological Engineering and Koch Institute for Integrative Cancer Research, Massachusetts Institute of Technology, Cambridge, MA, United States.
Ken S LauDepartment of Cell and Developmental Biology and Program in Developmental Biology, Vanderbilt University, Nashville, TN, United States.
Vanderbilt University Medical Center · USVanderbilt University · USMassachusetts Institute of Technology · US

Funding

Tumor Immunology and Microenvironment Research ProgramP30CA068485 · NCI · VANDERBILT UNIVERSITY MEDICAL CENTER · PI STACIE B DUSETZINA · 1995 to 2026
$172.8M
Translational Analysis CoreP30DK058404 · NIDDK · VANDERBILT UNIVERSITY MEDICAL CENTER · PI RICHARD M. PEEK · 2002 to 2026
$29.9M
Vanderbilt-Ingram Cancer Center SPORE in Gastrointestinal CancerP50CA236733 · NCI · VANDERBILT UNIVERSITY MEDICAL CENTER · PI Robert J. Coffey · 2019 to 2026
$19.6M
Molecular, Cellular and Tissue Characterization UnitU2CCA233291 · NCI · VANDERBILT UNIVERSITY MEDICAL CENTER · PI COFFEY, ROBERT J. · 2018 to 2023
$12.2M
Integrated approach to study early and late events in colonic neoplasia: mouse to manR35CA197570 · NCI · VANDERBILT UNIVERSITY MEDICAL CENTER · PI Robert J. Coffey · 2017 to 2026
$9.4M
Training Program in Stem Cell and Regenerative Developmental BiologyT32HD007502 · NICHD · VANDERBILT UNIVERSITY · PI WRIGHT, CHRISTOPHER V · 1997 to 2022
$5.4M
Tuft cell heterogeneity in function, lineage, and structure in ileal inflammatory diseaseR01DK103831 · NIDDK · VANDERBILT UNIVERSITY · PI LAU, KEN S · 2016 to 2024
$4.4M
Systems approaches to understanding the relationships between genotype, signaling, and therapeutic efficacyU01CA215798 · NCI · MASSACHUSETTS INSTITUTE OF TECHNOLOGY · PI HAAS, WILHELM, HAIGIS, KEVIN · 2017 to 2021
$3.7M
Proinflammatory properties of Paneth cells in intestinal inflammationF31DK127687 · NIDDK · VANDERBILT UNIVERSITY · PI SPENCER, PAIGE NICOLE · 2021 to 2023
$104k
NCI NIH HHS P30 CA068485NCI NIH HHS P50 CA236733NCI NIH HHS R35 CA197570NCI NIH HHS U01 CA215798NCI NIH HHS U2C CA233291NICHD NIH HHS T32 HD007502NIDDK NIH HHS F31 DK127687NIDDK NIH HHS P30 DK058404NIDDK NIH HHS R01 DK103831
6 · The paper itself

Abstract

The tumor microenvironment plays a key role in the pathogenesis of colorectal tumors and contains various cell types including epithelial, immune, and mesenchymal cells. Characterization of the interactions between these cell types is necessary for revealing the complex nature of tumors. In this study, we used single-cell RNA-seq (scRNA-seq) to compare the tumor microenvironments between a mouse model of sporadic colorectal adenoma (Lrig1

Indexed as

adaptive immunitycancer associated fibroblasts (CAF)colorectal cancerinflammationsquamous cellsstem cellstumor microenvironment

Identifiers

PMID35600339
PMCPMC9114773
OpenAlexW4225390776

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.