Evidence map›Paper›PMID 35595785›Full record

ArticleScientific reports2022

X-linked palindromic gene families 4930567H17Rik and Mageb5 are dispensable for male mouse fertility.

Evan R Stark-Dykema, Eden A Dulka, Emma R Gerlinger, Jacob L Mueller

Open access · goldAbstract read
In one paragraph

Article in Scientific reports, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
0.4field-weighted citation impact, top 33% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed, 4 citations in OpenAlex.

  1. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 1 institution in 1 country.

Evan R Stark-Dykema *Department of Human Genetics, University of Michigan Medical School, Ann Arbor, MI, 48109, USA.
Eden A Dulka *Department of Human Genetics, University of Michigan Medical School, Ann Arbor, MI, 48109, USA.
Emma R GerlingerDepartment of Human Genetics, University of Michigan Medical School, Ann Arbor, MI, 48109, USA.
Jacob L MuellerDepartment of Human Genetics, University of Michigan Medical School, Ann Arbor, MI, 48109, USA. jacobmu@umich.edu.
University of Michigan–Ann Arbor · US

Funding

Roles of X- and Y-palindromic Genes in Mammalian FertilityR01HD094736 · NICHD · UNIVERSITY OF MICHIGAN AT ANN ARBOR · PI MUELLER, JACOB L · 2018 to 2022
$1.8M
The Role of KDM5D in AzoospermiaF32HD105375 · NICHD · UNIVERSITY OF MICHIGAN AT ANN ARBOR · PI DULKA, EDEN ANN · 2021 to 2023
$205k
NICHD NIH HHS F32 HD105375NICHD NIH HHS R01 HD094736NICHD NIH HHS R01HD094736
6 · The paper itself

Abstract

Mammalian sex chromosomes are enriched for large, nearly-identical, palindromic sequences harboring genes expressed predominately in testicular germ cells. Discerning if individual palindrome-associated gene families are essential for male reproduction is difficult due to challenges in disrupting all copies of a gene family. Here we generate precise, independent, deletions to assess the reproductive roles of two X-linked palindromic gene families with spermatid-predominant expression, 4930567H17Rik and Mageb5. Sequence analyses reveals mouse 4930567H17Rik and Mageb5 are orthologs of human HSFX3 and MAGEB5, respectively, where 4930567H17Rik/HSFX3 is harbored in a palindrome in humans and mice, while Mageb5 is not. Additional sequence analyses show 4930567H17Rik and HSFX3 are rapidly diverging in rodents and primates, respectively. Mice lacking either 4930567H17Rik or Mageb5 gene families do not have detectable defects in male fertility, fecundity, spermatogenesis, or in gene regulation, but do show differences in sperm head morphology, suggesting a potential role in sperm function. We conclude that while all palindrome-associated gene families are not essential for male fertility, large palindromes influence the evolution of their associated gene families.

Indexed as

Sex ChromosomesSpermatogenesisAnimalsFertilityMaleMammalsMiceSpermatozoaTestis

Identifiers

PMID35595785
PMCPMC9122934
OpenAlexW4280520176

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.