Evidence map›Paper›PMID 35593444›Full record

ArticleAdvanced materials (Deerfield Beach, Fla.)2022

Machine Learning on a Robotic Platform for the Design of Polymer-Protein Hybrids.

Matthew J Tamasi, Roshan A Patel, Carlos H Borca, Shashank Kosuri, Heloise Mugnier, Rahul Upadhya, N Sanjeeva Murthy, Michael A Webb, Adam J Gormley

Abstract read
In one paragraph

Article in Advanced materials (Deerfield Beach, Fla.), 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 67 papers.

0numbers the graph read from it
0cells of the map it votes in
67citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

67 citing papers in PubMed.

  1. Review
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  13. Tuning Polyacrylate Composition to Recognize and Modulate Fluorescent Proteins.Angewandte Chemie (International ed. in English) · 2026
    Article
  14. Article
  15. Article
  16. Review
  17. Review
  18. Article
  19. Article
  20. Artificial intelligence in bioinformatics: a survey.Briefings in bioinformatics · 2025
    Review

7 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors.

Matthew J TamasiDepartment of Biomedical Engineering, Rutgers, The State University of New Jersey, Piscataway, NJ, 08854, USA.ORCID https://orcid.org/0000-0002-9873-172X
Roshan A PatelDepartment of Chemical and Biological Engineering, Princeton University, Princeton, NJ, 08544, USA.ORCID https://orcid.org/0000-0001-8498-0189
Carlos H BorcaDepartment of Chemical and Biological Engineering, Princeton University, Princeton, NJ, 08544, USA.ORCID https://orcid.org/0000-0003-0683-7613
Shashank KosuriDepartment of Biomedical Engineering, Rutgers, The State University of New Jersey, Piscataway, NJ, 08854, USA.ORCID https://orcid.org/0000-0001-9973-3930
Heloise MugnierDepartment of Biomedical Engineering, Rutgers, The State University of New Jersey, Piscataway, NJ, 08854, USA.ORCID https://orcid.org/0000-0002-2436-5907
Rahul UpadhyaDepartment of Biomedical Engineering, Rutgers, The State University of New Jersey, Piscataway, NJ, 08854, USA.ORCID https://orcid.org/0000-0002-6268-8029
N Sanjeeva MurthyDepartment of Biomedical Engineering, Rutgers, The State University of New Jersey, Piscataway, NJ, 08854, USA.ORCID https://orcid.org/0000-0002-2324-5874
Michael A WebbDepartment of Chemical and Biological Engineering, Princeton University, Princeton, NJ, 08544, USA.ORCID https://orcid.org/0000-0003-3574-4686
Adam J GormleyDepartment of Biomedical Engineering, Rutgers, The State University of New Jersey, Piscataway, NJ, 08854, USA.ORCID https://orcid.org/0000-0002-2884-725X

Funding

X-ray Scattering Technology CoreP30GM133893 · NIGMS · BROOKHAVEN SCIENCE ASSOC-BROOKHAVEN LAB · PI Sean McSweeney · 2019 to 2026
$38.6M
X-RAY STRUCTURE OF RIFM PROTEIN FROM THE BIOSYNTHESIS PATHWAY OF THE ANSAMYCIN AP41RR012408 · NCRR · BROOKHAVEN SCIENCE ASSOC-BROOKHAVEN LAB · PI ORVILLE, ALLEN M · 1998 to 2011
$32.2M
Rutgers Biotechnology Training ProgramT32GM135141 · NIGMS · RUTGERS, THE STATE UNIV OF N.J. · PI ANN M. STOCK, Martin L Yarmush · 2020 to 2026
$3.5M
Tuning multivalency for optimized ligand presentationR35GM138296 · NIGMS · RUTGERS, THE STATE UNIV OF N.J. · PI GORMLEY, ADAM JOSEPH · 2020 to 2024
$2.3M
A Simultaneous SAXS/WAXS Detector System for Solving Biological StructuresS10OD012331 · OD · STATE UNIVERSITY NEW YORK STONY BROOK · PI ALLAIRE, MARC · 2012 to 2012
$1.1M
NCRR NIH HHS P41 RR012408NIGMS NIH HHS P30 GM133893NIGMS NIH HHS R35 GM138296NIGMS NIH HHS R35GM138296NIGMS NIH HHS T32 GM135141NIGMS NIH HHS T32GM135141NIH HHS S10 OD012331
6 · The paper itself

Abstract

Polymer-protein hybrids are intriguing materials that can bolster protein stability in non-native environments, thereby enhancing their utility in diverse medicinal, commercial, and industrial applications. One stabilization strategy involves designing synthetic random copolymers with compositions attuned to the protein surface, but rational design is complicated by the vast chemical and composition space. Here, a strategy is reported to design protein-stabilizing copolymers based on active machine learning, facilitated by automated material synthesis and characterization platforms. The versatility and robustness of the approach is demonstrated by the successful identification of copolymers that preserve, or even enhance, the activity of three chemically distinct enzymes following exposure to thermal denaturing conditions. Although systematic screening results in mixed success, active learning appropriately identifies unique and effective copolymer chemistries for the stabilization of each enzyme. Overall, this work broadens the capabilities to design fit-for-purpose synthetic copolymers that promote or otherwise manipulate protein activity, with extensions toward the design of robust polymer-protein hybrid materials.

Indexed as

PolymersRobotic Surgical ProceduresMachine LearningProteinsPolymersProteinsactive learningBayesian optimizationcombinatorial polymer designmachine learningpolymer-protein conjugatesprotein formulationssingle-enzyme nanoparticles

Identifiers

PMID35593444
PMCPMC9339531

What OpenQuestion holds

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LicenceCC BY-NC-ND
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.