Evidence map›Paper›PMID 35592602›Full record

ArticleBio-protocol2022

Labeling Endogenous Proteins Using CRISPR-mediated Insertion of Exon (CRISPIE).

Evan A Wilson, Tianyi Mao, Haining Zhong

Open access · hybridAbstract read
In one paragraph

Article in Bio-protocol, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
0.1field-weighted citation impact, top 60% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed, 1 citations in OpenAlex.

  1. Dynamic water relations and alternative splicing in common bean under progressive soil drought and recovery.TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik · 2026
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors at 1 institution in 1 country.

Evan A WilsonVollum Institute, Oregon Health & Sciences University, Portland, OR, USA.
Tianyi MaoVollum Institute, Oregon Health & Sciences University, Portland, OR, USA.
Haining ZhongVollum Institute, Oregon Health & Sciences University, Portland, OR, USA.
Vollum Institute · US

Funding

Genetic and physiological dissection of the circuit mechanisms in the striatum.R01NS081071 · NINDS · OREGON HEALTH & SCIENCE UNIVERSITY · PI MAO, TIANYI · 2013 to 2023
$3.6M
Cell-Specific Visualization of Endogenous ProteinsRF1MH120119 · NIMH · OREGON HEALTH & SCIENCE UNIVERSITY · PI MAO, TIANYI, ZHONG, HAINING · 2019 to 2019
$2.8M
NIMH NIH HHS RF1 MH120119NINDS NIH HHS R01 NS081071
6 · The paper itself

Abstract

The CRISPR/Cas9 technology has transformed our ability to edit eukaryotic genomes. Despite this breakthrough, it remains challenging to precisely knock-in large DNA sequences, such as those encoding a fluorescent protein, for labeling or modifying a target protein in post-mitotic cells. Previous efforts focusing on sequence insertion to the protein coding sequence often suffer from insertions/deletions (INDELs) resulting from the efficient non-homologous end joining pathway (NHEJ). To overcome this limitation, we have developed CRISPR-mediated insertion of exon (CRISPIE). CRISPIE circumvents INDELs and other editing errors by inserting a designer exon flanked by adjacent intron sequences into an appropriate intronic location of the targeted gene. Because INDELs at the insertion junction can be spliced out, "CRISPIEd" genes produce precisely edited mRNA transcripts that are virtually error-free. In part due to the elimination of INDELs, high-efficiency labeling can be achieved

Indexed as

CRISPR/Cas9Fluorescence microscopyFluorescent labeling of endogenous proteinsGenome editingKnock-inNon-homologous end joining (NHEJ)Somatic cell editingTransfection

Identifiers

PMID35592602
PMCPMC8918219
OpenAlexW4214910457

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.