Evidence map›Paper›PMID 35590448›Full record

ArticleEnvironmental microbiology2022

Transmission of Klebsiella strains and plasmids within and between grey-headed flying fox colonies.

Ben Vezina, Louise M Judd, Fiona K McDougall, Wayne S J Boardman, Michelle L Power, Jane Hawkey, Sylvain Brisse, Jonathan M Monk, Kathryn E Holt, Kelly L Wyres

Open access · hybridAbstract read
In one paragraph

Article in Environmental microbiology, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 6 papers.

0numbers the graph read from it
0cells of the map it votes in
6citing papers in PubMed
1.9field-weighted citation impact, top 14% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

6 citing papers in PubMed, 10 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 6 institutions in 4 countries.

Ben VezinaDepartment of Infectious Diseases, Central Clinical School, Monash University, Melbourne, Vic., Australia.ORCID 0000-0003-4224-2537
Louise M JuddDepartment of Infectious Diseases, Central Clinical School, Monash University, Melbourne, Vic., Australia.ORCID 0000-0003-3613-4839
Fiona K McDougallDepartment of Biological Sciences, Macquarie University, NSW, 2109, Australia.ORCID 0000-0001-8669-9702
Wayne S J BoardmanSchool of Animal and Veterinary Sciences, University of Adelaide, SA, 5371, Australia.ORCID 0000-0002-1746-0682
Michelle L PowerDepartment of Biological Sciences, Macquarie University, NSW, 2109, Australia.ORCID 0000-0003-3160-4301
Jane HawkeyDepartment of Infectious Diseases, Central Clinical School, Monash University, Melbourne, Vic., Australia.ORCID 0000-0001-9661-5293
Sylvain BrisseInstitut Pasteur, Université de Paris, Biodiversity and Epidemiology of Bacterial Pathogens, Paris, France.ORCID 0000-0002-2516-2108
Jonathan M MonkDepartment of Bioengineering, University of California, San Diego, CA.ORCID 0000-0002-3895-8949
Kathryn E HoltDepartment of Infectious Diseases, Central Clinical School, Monash University, Melbourne, Vic., Australia.ORCID 0000-0003-3949-2471
Kelly L WyresDepartment of Infectious Diseases, Central Clinical School, Monash University, Melbourne, Vic., Australia.ORCID 0000-0002-4033-6639
Monash University · AUMacquarie University · AUInstitut Pasteur · FRLondon School of Hygiene & Tropical Medicine · GBThe University of Adelaide · AUUniversity of California San Diego · US

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The grey-headed flying fox (Pteropus poliocephalus) is an endemic Australian fruit bat, known to carry zoonotic pathogens. We recently showed they harbour bacterial pathogen Klebsiella pneumoniae and closely related species in the K. pneumoniae species complex (KpSC); however, the dynamics of KpSC transmission and gene flow within flying fox colonies are poorly understood. High-resolution genome comparisons of 39 KpSC isolates from grey-headed flying foxes identified five putative strain transmission clusters (four intra- and one inter-colony). The instance of inter-colony strain transmission of K. africana was found between two flying fox populations within flying distance, indicating either direct or indirect transmission through a common food/water source. All 11 plasmids identified within the KpSC isolates showed 73% coverage (mean) and ≥95% identity to human-associated KpSC plasmids, indicating gene flow between human clinical and grey-headed flying fox isolates. Along with strain transmission, inter-species horizontal plasmid transmission between K. pneumoniae and Klebsiella africana was also identified within a flying fox colony. Finally, genome-scale metabolic models were generated to predict and compare substrate usage to previously published KpSC models, from human and environmental sources. These models indicated no distinction on the basis of metabolic capabilities. Instead, metabolic capabilities were consistent with population structure and ST/lineage.

Indexed as

ChiropteraAnimalsAustraliaHumansKlebsiellaPlasmidsWaterWater

Identifiers

PMID35590448
PMCPMC9790207
OpenAlexW4280593658

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.