Evidence map›Paper›PMID 35590243›Full record

ArticleBMC microbiology2022

Molecular characteristics of Mycobacterium tuberculosis drug-resistant isolates from HIV- and HIV+ tuberculosis patients in Russia.

Anna E Panova, Anatoliy S Vinokurov, Anastasiya A Shemetova, Irina A Burmistrova, Marina V Shulgina, Anastasiya G Samoilova, Irina A Vasilyeva, Diana V Vakhrusheva, Tatiana V Umpeleva, Nataliya I Eremeeva and 9 more

Open access · goldAbstract read
In one paragraph

Article in BMC microbiology, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
0.3field-weighted citation impact, top 45% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed, 4 citations in OpenAlex.

  1. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

19 authors at 5 institutions in 1 country.

Anna E PanovaNational Medical Research Center of Phthisiopulmonology and Infectious Diseases, Ministry of Public Heath of the Russian Federation (NMRC PhID), Moscow, Russian Federation.
Anatoliy S VinokurovNational Medical Research Center of Phthisiopulmonology and Infectious Diseases, Ministry of Public Heath of the Russian Federation (NMRC PhID), Moscow, Russian Federation.
Anastasiya A ShemetovaNational Medical Research Center of Phthisiopulmonology and Infectious Diseases, Ministry of Public Heath of the Russian Federation (NMRC PhID), Moscow, Russian Federation.
Irina A BurmistrovaNational Medical Research Center of Phthisiopulmonology and Infectious Diseases, Ministry of Public Heath of the Russian Federation (NMRC PhID), Moscow, Russian Federation.
Marina V ShulginaNational Medical Research Center of Phthisiopulmonology and Infectious Diseases, Ministry of Public Heath of the Russian Federation (NMRC PhID), Moscow, Russian Federation. m_shulgina@mail.ru.
Anastasiya G SamoilovaNational Medical Research Center of Phthisiopulmonology and Infectious Diseases, Ministry of Public Heath of the Russian Federation (NMRC PhID), Moscow, Russian Federation.
Irina A VasilyevaNational Medical Research Center of Phthisiopulmonology and Infectious Diseases, Ministry of Public Heath of the Russian Federation (NMRC PhID), Moscow, Russian Federation.
Diana V VakhrushevaUral Research Institute of Phthisiopulmonology -Branch of NMRC PhID, Ekaterinburg, Russian Federation.
Tatiana V UmpelevaUral Research Institute of Phthisiopulmonology -Branch of NMRC PhID, Ekaterinburg, Russian Federation.
Nataliya I EremeevaUral Research Institute of Phthisiopulmonology -Branch of NMRC PhID, Ekaterinburg, Russian Federation.
Leonid S LavrenchukUral Research Institute of Phthisiopulmonology -Branch of NMRC PhID, Ekaterinburg, Russian Federation.
Lyudmila A GolubevaUral Research Institute of Phthisiopulmonology -Branch of NMRC PhID, Ekaterinburg, Russian Federation.
Tatiana I DanilovaRegional TB dispensary of Leningradskaya oblast, Saint Petersburg, Russian Federation.
Tatiana B VasilyevaRegional TB dispensary of Leningradskaya oblast, Saint Petersburg, Russian Federation.
Vera A Ugol'kovaRegional TB dispensary of Leningradskaya oblast, Saint Petersburg, Russian Federation.
Nataliya V SosovaRegional TB dispensary of Stavropolskiy kray, Stavropol, Russian Federation.
Marina V LekhlyaiderRegional TB dispensary of Chelyabinskaya oblast, Chelyabinsk, Russian Federation.
Irina A GorshkovaRegional TB dispensary of Chelyabinskaya oblast, Chelyabinsk, Russian Federation.
Tatiana A RomanovaRegional TB dispensary of Kemerovskaya oblast, Kemerovo, Russian Federation.
Ural research Institute of Phthisiopulmonology · RULeningrad Regional Cancer Center · RUChelyabinsk Regional Clinical Oncology Center · RUKemerovo Cardiology Center · RUStavropol Regional Clinical Oncology Center · RU

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

backgroundHigh burden of drug-resistant (DR) tuberculosis (TB) is a significant threat to national TB control programs all over the world and in the Russian Federation. Different Mycobacterium tuberculosis (MTB) genotypes are hypothesized to have specific characteristics affecting TB control programs. For example, Beijing strains are supposed to have higher mutation rates compared to strains of other genotypes and subsequently higher capability to develop drug-resistance.

resultsClinical MTB isolates from HIV- and HIV+ patients from four regions of Russia were analyzed for genotypes and mutations conferring resistance to Isoniazid, Rifampicin, Ethambutol, aminoglycosides, and fluoroquinolones. Analysis of genotypes and polymorphism of genomic loci according to the HIV status of the patients - sources of MTB isolates were performed. Studied MTB isolates from HIV- TB patients belonged to 15 genotypes and from HIV + TB patients - to 6 genotypes. Beijing clinical isolates dominated in HIV- (64,7%) and HIV+ (74,4%) groups. Other isolates were of LAM (including LAM1 and LAM9), Ural, and 4 minor groups of genotypes (including 5 subclones T). The spectrum of genotypes in the HIV- group was broader than in the HIV+ group. PR of B0/W148 Beijing was significantly lower than of other Beijing genotypes in susceptible and MDR-XDR isolates. Rates of isolates belonging to non-Beijing genotypes were higher than Beijing in susceptible isolates from HIV- patients.

conclusionsBeijing genotype isolates prevailed in clinical isolates of all drug susceptibility profiles both from HIV- and HIV+ patients, although B0/W148 Beijing genotype did not dominate in this study. Genome loci and mutations polymorphisms were more pronounced in clinical isolates from HIV- patients, than from HIV+.

Indexed as

HIV InfectionsMycobacterium tuberculosisTuberculosisTuberculosis, Multidrug-ResistantAntitubercular AgentsDrug Resistance, Multiple, BacterialGenotypeHumansRussiaAntitubercular AgentsBeijingDrug-resistance conferring mutationsGenotypesMycobacterium tuberculosis

Identifiers

PMID35590243
PMCPMC9118847
OpenAlexW4280511213

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.