Evidence map›Paper›PMID 35590030›Full record

ArticleCommunications biology2022

Histone macroH2A1 is a stronger regulator of hippocampal transcription and memory than macroH2A2 in mice.

Gurdeep Singh, Gilda Stefanelli, Klotilda Narkaj, Mark A Brimble, Samantha D Creighton, Timothy A B McLean, Meaghan Hall, Krista A Mitchnick, Jacqueline Zakaria, Thanh Phung and 9 more

Erratum issuedOpen access · goldAbstract read
In one paragraph

Article in Communications biology, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. An erratum has been issued. Cited by 13 papers.

0numbers the graph read from it
0cells of the map it votes in
13citing papers in PubMed
1.3field-weighted citation impact, top 21% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

13 citing papers in PubMed, 15 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Review
  5. Article
  6. Review
  7. Role of the histone variant H2A.Z.1 in memory, transcription, and alternative splicing is mediated by lysine modification.Neuropsychopharmacology : official publication of the American College of Neuropsychopharmacology · 2024
    Article
  8. Article
  9. Review
  10. Review
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  13. Article
4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

19 authors at 5 institutions in 2 countries.

Gurdeep Singh *Department of Cell & Systems Biology, University of Toronto, Toronto, ON, M5S 3G3, Canada.ORCID http://orcid.org/0000-0003-2519-0456
Gilda Stefanelli *Department of Psychology, University of Toronto Mississauga, Mississauga, ON, L5L 1C6, Canada.
Klotilda Narkaj *Department of Cell & Systems Biology, University of Toronto, Toronto, ON, M5S 3G3, Canada.
Mark A BrimbleDepartment of Surgery, St. Jude Children's Research Hospital, Memphis, TN, 38105, USA.
Samantha D CreightonDepartment of Psychology, University of Toronto Mississauga, Mississauga, ON, L5L 1C6, Canada.
Timothy A B McLeanDepartment of Cell & Systems Biology, University of Toronto, Toronto, ON, M5S 3G3, Canada.
Meaghan HallDepartment of Psychology, University of Toronto Mississauga, Mississauga, ON, L5L 1C6, Canada.
Krista A MitchnickDepartment of Psychology, York University, Toronto, ON, M4N 3M6, Canada.
Jacqueline ZakariaDepartment of Psychology, University of Toronto Mississauga, Mississauga, ON, L5L 1C6, Canada.
Thanh PhungDepartment of Cell & Systems Biology, University of Toronto, Toronto, ON, M5S 3G3, Canada.
Anas RedaDepartment of Cell & Systems Biology, University of Toronto, Toronto, ON, M5S 3G3, Canada.
Amanda M LeonettiDepartment of Cell & Systems Biology, University of Toronto, Toronto, ON, M5S 3G3, Canada.
Ashley MonksDepartment of Psychology, University of Toronto Mississauga, Mississauga, ON, L5L 1C6, Canada.
Lara IanovCivitan International Research Center, University of Alabama at Birmingham, Birmingham, AL, 35233, USA.ORCID http://orcid.org/0000-0002-1859-2118
Boyer D WintersDepartment of Psychology, University of Guelph, Guelph, ON, N1G 2W1, Canada.
Brandon J WaltersDepartment of Biology, University of Toronto Mississauga, Mississauga, ON, L5L 1C6, Canada.ORCID http://orcid.org/0000-0002-8073-6573
Andrew M DavidoffDepartment of Surgery, St. Jude Children's Research Hospital, Memphis, TN, 38105, USA.ORCID http://orcid.org/0000-0001-7900-2794
Jennifer A MitchellDepartment of Cell & Systems Biology, University of Toronto, Toronto, ON, M5S 3G3, Canada. ja.mitchell@utoronto.ca.ORCID http://orcid.org/0000-0002-7147-4604
Iva B ZovkicDepartment of Psychology, University of Toronto Mississauga, Mississauga, ON, L5L 1C6, Canada. iva.zovkic@utoronto.ca.ORCID http://orcid.org/0000-0002-4497-6334
University of Toronto · CASt. Jude Children's Research Hospital · USCivitan International · USUniversity of Guelph · CAYork University · CA

Funding

CIHR PJT-156414
6 · The paper itself

Abstract

Histone variants H2A.Z and H3.3 are epigenetic regulators of memory, but roles of other variants are not well characterized. macroH2A (mH2A) is a structurally unique histone that contains a globular macrodomain connected to the histone region by an unstructured linker. Here we assessed if mH2A regulates memory and if this role varies for the two mH2A-encoding genes, H2afy (mH2A1) and H2afy2 (mH2A2). We show that fear memory is impaired in mH2A1, but not in mH2A2-deficient mice, whereas both groups were impaired in a non-aversive spatial memory task. However, impairment was larger for mH2A1- deficient mice, indicating a preferential role for mH2A1 over mH2A2 in memory. Accordingly, mH2A1 depletion in the mouse hippocampus resulted in more extensive transcriptional de-repression compared to mH2A2 depletion. mH2A1-depleted mice failed to induce a normal transcriptional response to fear conditioning, suggesting that mH2A1 depletion impairs memory by altering transcription. Using chromatin immunoprecipitation (ChIP) sequencing, we found that both mH2A proteins are enriched on transcriptionally repressed genes, but only mH2A1 occupancy was dynamically modified during learning, displaying reduced occupancy on upregulated genes after training. These data identify mH2A as a regulator of memory and suggest that mH2A1 supports memory by repressing spurious transcription and promoting learning-induced transcriptional activation.

Indexed as

HippocampusHistonesAnimalsMiceHistones

Identifiers

PMID35590030
PMCPMC9120515
OpenAlexW4280615462

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.