Evidence map›Paper›PMID 35589712›Full record

ArticleNature communications2022

A truncated anti-CRISPR protein prevents spacer acquisition but not interference.

Cécile Philippe, Carlee Morency, Pier-Luc Plante, Edwige Zufferey, Rodrigo Achigar, Denise M Tremblay, Geneviève M Rousseau, Adeline Goulet, Sylvain Moineau

Erratum issuedOpen access · goldAbstract read
In one paragraph

Article in Nature communications, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. An erratum has been issued. Cited by 9 papers.

0numbers the graph read from it
0cells of the map it votes in
9citing papers in PubMed
1.5field-weighted citation impact, top 18% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

9 citing papers in PubMed, 17 citations in OpenAlex.

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4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

9 authors at 4 institutions in 4 countries.

Cécile PhilippeDépartement de biochimie, microbiologie, et bio-informatique, Faculté des sciences et de génie, Université Laval, Québec City, QC, Canada.
Carlee MorencyDépartement de biochimie, microbiologie, et bio-informatique, Faculté des sciences et de génie, Université Laval, Québec City, QC, Canada.
Pier-Luc PlanteDépartement de médecine moléculaire, Faculté de médecine, Université Laval, Québec City, QC, Canada.ORCID 0000-0002-3700-8239
Edwige ZuffereyDépartement de biochimie, microbiologie, et bio-informatique, Faculté des sciences et de génie, Université Laval, Québec City, QC, Canada.
Rodrigo AchigarLaboratorio de Microbiología Molecular, Departamento de Biociencias, Facultad de Química, Universidad de la República, Montevideo, Uruguay.
Denise M TremblayGroupe de recherche en écologie buccale, Faculté de médecine dentaire, Université Laval, Québec City, QC, Canada.
Geneviève M RousseauDépartement de biochimie, microbiologie, et bio-informatique, Faculté des sciences et de génie, Université Laval, Québec City, QC, Canada.ORCID 0000-0002-1792-626X
Adeline GouletLaboratoire d'Ingénierie des Systèmes Macromoléculaires, Institut de Microbiologie, Bioénergies et Biotechnologie, CNRS UMR7255, Aix-Marseille Université, Marseille, 13402, France.
Sylvain MoineauDépartement de biochimie, microbiologie, et bio-informatique, Faculté des sciences et de génie, Université Laval, Québec City, QC, Canada. Sylvain.Moineau@bcm.ulaval.ca.ORCID 0000-0002-2832-5101
Groupe de Recherche en Économie Théorique et Appliquée · FRBeijing Institute of Big Data Research · CNCentre National de la Recherche Scientifique · FRUniversidad de la República de Uruguay · UY

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

CRISPR-Cas systems in prokaryotic cells provide an adaptive immunity against invading nucleic acids. For example, phage infection leads to addition of new immunity (spacer acquisition) and DNA cleavage (interference) in the bacterial model species Streptococcus thermophilus, which primarily relies on Cas9-containing CRISPR-Cas systems. Phages can counteract this defense system through mutations in the targeted protospacers or by encoding anti-CRISPR proteins (ACRs) that block Cas9 interference activity. Here, we show that S. thermophilus can block ACR-containing phages when the CRISPR immunity specifically targets the acr gene. This in turn selects for phage mutants carrying a deletion within the acr gene. Remarkably, a truncated acrIIA allele, found in a wild-type virulent streptococcal phage, does not block the interference activity of Cas9 but still prevents the acquisition of new immunities, thereby providing an example of an ACR specifically inhibiting spacer acquisition.

Indexed as

BacteriophagesCRISPR-Cas SystemsStreptococcus thermophilus

Identifiers

PMID35589712
PMCPMC9120153
OpenAlexW4280509090

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.