Evidence map›Paper›PMID 35588208›Full record

ArticleDevelopment (Cambridge, England)2022

Uncoupling transcription and translation through miRNA-dependent poly(A) length control in haploid male germ cells.

Mei Guo, Chunhai Luo, Zhuqing Wang, Sheng Chen, Dayton Morris, Fengying Ruan, Zhichao Chen, Linfeng Yang, Xiongyi Wei, Chuanwen Wu and 11 more

Open access · bronzeAbstract read
In one paragraph

Article in Development (Cambridge, England), 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 11 papers.

0numbers the graph read from it
0cells of the map it votes in
11citing papers in PubMed
1.4field-weighted citation impact, top 20% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

11 citing papers in PubMed, 18 citations in OpenAlex.

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  7. The Rapidly Evolving X-linkedbioRxiv : the preprint server for biology · 2024
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

21 authors at 4 institutions in 2 countries.

Mei GuoR&D Department, BGI Genomics, BGI-Shenzhen, Shenzhen 518083, China.
Chunhai LuoInstitute of Reproductive Medicine, Nantong University School of Medicine, Nantong University, Nantong 226001, Jiangsu, China.
Zhuqing WangDepartment of Physiology and Cell Biology, University of Nevada, Reno School of Medicine, 1664 North Virginia Street, MS575, Reno, NV 89557, USA.ORCID 0000-0002-3988-0733
Sheng ChenDepartment of Endocrinology and Metabolism, The Lundquist Institute for Biomedical Innovation at Harbor-UCLA Medical Center, Torrance, CA 90502, USA.ORCID 0000-0002-2089-3227
Dayton MorrisDepartment of Endocrinology and Metabolism, The Lundquist Institute for Biomedical Innovation at Harbor-UCLA Medical Center, Torrance, CA 90502, USA.
Fengying RuanR&D Department, BGI Genomics, BGI-Shenzhen, Shenzhen 518083, China.
Zhichao ChenR&D Department, BGI Genomics, BGI-Shenzhen, Shenzhen 518083, China.
Linfeng YangR&D Department, BGI Genomics, BGI-Shenzhen, Shenzhen 518083, China.
Xiongyi WeiInstitute of Reproductive Medicine, Nantong University School of Medicine, Nantong University, Nantong 226001, Jiangsu, China.
Chuanwen WuR&D Department, BGI Genomics, BGI-Shenzhen, Shenzhen 518083, China.
Bei LuoR&D Department, BGI Genomics, BGI-Shenzhen, Shenzhen 518083, China.
Zhou LvR&D Department, BGI Genomics, BGI-Shenzhen, Shenzhen 518083, China.
Jin HuangR&D Department, BGI Genomics, BGI-Shenzhen, Shenzhen 518083, China.
Dong ZhangR&D Department, BGI Genomics, BGI-Shenzhen, Shenzhen 518083, China.
Cong YuR&D Department, BGI Genomics, BGI-Shenzhen, Shenzhen 518083, China.
Qiang GaoR&D Department, BGI Genomics, BGI-Shenzhen, Shenzhen 518083, China.
Hongqi WangR&D Department, BGI Genomics, BGI-Shenzhen, Shenzhen 518083, China.
Ying ZhangInstitute of Reproductive Medicine, Nantong University School of Medicine, Nantong University, Nantong 226001, Jiangsu, China.ORCID 0000-0002-7889-7124
Fei SunInstitute of Reproductive Medicine, Nantong University School of Medicine, Nantong University, Nantong 226001, Jiangsu, China.ORCID 0000-0002-0870-8375
Wei YanDepartment of Physiology and Cell Biology, University of Nevada, Reno School of Medicine, 1664 North Virginia Street, MS575, Reno, NV 89557, USA.ORCID 0000-0001-9569-9026
Chong TangR&D Department, BGI Genomics, BGI-Shenzhen, Shenzhen 518083, China.ORCID 0000-0002-6898-8946
BGI Group (China) · CNNantong University · CNUCLA Medical Center · USUniversity of Nevada, Reno · US

Funding

Mechanism Underlying the Transduction of Epimutations from the Soma to the Male GermlineP50HD098593 · NICHD · UNIVERSITY OF NEVADA RENO · PI ZHOU, TONG · 2019 to 2024
$7.2M
Single Cell Molecular ExpressionP30GM110767 · NIGMS · UNIVERSITY OF NEVADA RENO · PI SANDERS, KENTON M · 2014 to 2018
$5.4M
Epitranscriptomic regulation of spermatogenesis and male fertilityR01HD099924 · NICHD · LUNDQUIST INSTITUTE FOR BIOMEDICAL INNOVATION AT HARBOR-UCLA MEDICAL CENTER · PI YAN, WEI · 2020 to 2024
$1.9M
Messenger RNA Fate Control in SpermatogenesisR01HD085506 · NICHD · UNIVERSITY OF NEVADA RENO · PI SANDERS, KENTON M · 2015 to 2019
$1.5M
Are sperm-borne small RNAs important?R21HD071736 · NICHD · UNIVERSITY OF NEVADA RENO · PI YAN, WEI · 2012 to 2013
$380k
NICHD NIH HHS P50 HD098593NICHD NIH HHS R01 HD085506NICHD NIH HHS R01 HD099924NICHD NIH HHS R21 HD071736NIGMS NIH HHS P30 GM110767
6 · The paper itself

Abstract

As one of the post-transcriptional regulatory mechanisms, uncoupling of transcription and translation plays an essential role in development and adulthood physiology. However, it remains elusive how thousands of mRNAs get translationally silenced while stability is maintained for hours or even days before translation. In addition to oocytes and neurons, developing spermatids display significant uncoupling of transcription and translation for delayed translation. Therefore, spermiogenesis represents an excellent in vivo model for investigating the mechanism underlying uncoupled transcription and translation. Through full-length poly(A) deep sequencing, we discovered dynamic changes in poly(A) length through deadenylation and re-polyadenylation. Deadenylation appeared to be mediated by microRNAs (miRNAs), and transcripts with shorter poly(A) tails tend to be sequestered into ribonucleoprotein (RNP) granules for translational repression and stabilization. In contrast, re-polyadenylation might allow for translocation of the translationally repressed transcripts from RNP granules to polysomes. Overall, our data suggest that miRNA-dependent poly(A) length control represents a previously unreported mechanism underlying uncoupled translation and transcription in haploid male mouse germ cells.

Indexed as

MicroRNAsPoly AAnimalsHaploidyMaleMiceProtein BiosynthesisRNA, MessengerSpermatidsMicroRNAsPoly ARNA, MessengerAdenylationAlternative splicingDeadenylationInfertilityMicroRNAMousePoly(A) tailPolysomeRNPSpermiogenesisUncoupling of transcription and translation

Identifiers

PMID35588208
PMCPMC9270972
OpenAlexW4280607435

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.