Evidence map›Paper›PMID 35587637›Full record

ArticleMicrobiology spectrum2022

Successful Direct Whole Genome Sequencing and Revivification of Freeze-Dried Nontuberculous Mycobacteria after More than Half a Century of Storage.

Xenia Emilie Sinding Iversen, Anders Norman, Dorte Bek Folkvardsen, Erik Svensson, Erik Michael Rasmussen, Troels Lillebaek

Abstract read
In one paragraph

Article in Microbiology spectrum, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed.

  1. Article
  2. Article
  3. Four novel nontuberculous mycobacteria species:International journal of systematic and evolutionary microbiology · 2025
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors.

Xenia Emilie Sinding IversenInternational Reference Laboratory of Mycobacteriology, Statens Serum Institutgrid.6203.7, Copenhagen, Denmark.
Anders NormanInternational Reference Laboratory of Mycobacteriology, Statens Serum Institutgrid.6203.7, Copenhagen, Denmark.ORCID 0000-0002-1282-394X
Dorte Bek FolkvardsenInternational Reference Laboratory of Mycobacteriology, Statens Serum Institutgrid.6203.7, Copenhagen, Denmark.
Erik SvenssonInternational Reference Laboratory of Mycobacteriology, Statens Serum Institutgrid.6203.7, Copenhagen, Denmark.ORCID 0000-0003-0797-1080
Erik Michael RasmussenInternational Reference Laboratory of Mycobacteriology, Statens Serum Institutgrid.6203.7, Copenhagen, Denmark.
Troels LillebaekInternational Reference Laboratory of Mycobacteriology, Statens Serum Institutgrid.6203.7, Copenhagen, Denmark.ORCID 0000-0002-2601-2718

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

In this study, 28 "historical" clinical freeze-dried nontuberculous mycobacterial isolates collected from 1948 to 1957, were analyzed by investigating their viability and performing whole genome sequencing (WGS) on DNA extracted (i) directly from freeze-dried cells versus (ii) after culturing, to determine cell properties and DNA quality after centuries of freeze-dried storage. The isolated DNA was sequenced on the Illumina MiSeq platform and data quality evaluated analyzing the per-base quality scores of paired-end sequencing reads as well as the overall contiguity of resulting

Indexed as

MycobacteriumMycobacterium Infections, NontuberculousHumansNontuberculous MycobacteriaSequence Analysis, DNAWhole Genome Sequencing7 decadesancient strainsfreeze-driedmycobateriaNGSrevivification

Identifiers

PMID35587637
PMCPMC9241853

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.