Evidence map›Paper›PMID 35587600›Full record

ArticleThe Journal of clinical endocrinology and metabolism2022

Genetic Variants Associated With Mineral Metabolism Traits in Chronic Kidney Disease.

Marciana L Laster, Bryce Rowan, Hua-Chang Chen, Tae-Hwi Schwantes-An, Xin Sheng, Peter A Friedman, T Alp Ikizler, Janet S Sinshiemer, Joachim H Ix, Katalin Susztak and 6 more

Open access · bronzeAbstract read
In one paragraph

Article in The Journal of clinical endocrinology and metabolism, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 7 papers.

0numbers the graph read from it
0cells of the map it votes in
7citing papers in PubMed
1.3field-weighted citation impact, top 22% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

7 citing papers in PubMed, 10 citations in OpenAlex.

  1. Review
  2. Article
  3. Article
  4. Network Interactions of Circulating FGF23, HRG-HMGB1, and Cardiac Disease in CKD.Journal of the American Society of Nephrology : JASN · 2025
    Article
  5. The Intricacies of Renal Phosphate Reabsorption-An Overview.International journal of molecular sciences · 2024
    Review
  6. Molecular mechanism ofAmerican journal of translational research · 2023
    Article
  7. Genetic Variants Associated With Mineral Metabolism Traits in Chronic Kidney Disease.The Journal of clinical endocrinology and metabolism · 2022
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

16 authors at 9 institutions in 1 country.

Marciana L LasterDepartment of Pediatrics, University of California, Los Angeles, Los Angeles, California 90095-1752, USA.ORCID 0000-0001-6817-2448
Bryce RowanDepartment of Biostatistics, Vanderbilt University Medical Center, Nashville, Tennessee 37232, USA.
Hua-Chang ChenDepartment of Biostatistics, Vanderbilt University Medical Center, Nashville, Tennessee 37232, USA.
Tae-Hwi Schwantes-AnDepartment of Medical and Molecular Genetics, Indiana University School of Medicine, Indianapolis, Indiana 46202, USA.
Xin ShengDepartment of Medicine and Genetics, University of Pennsylvania, Philadelphia, Pennsylvania 19104, USA.
Peter A FriedmanDepartment of Pharmacology and Chemical Biology, University of Pittsburgh School of Medicine, Pittsburgh, Pennsylvania 15213, USA.
T Alp IkizlerDepartment of Medicine, Vanderbilt University Medical Center, Nashville, Tennessee, USA.
Janet S SinshiemerDepartment of Human Genetics and Computational Medicine, David Geffen School of Medicine at UCLA, Los Angeles, California 90095-1752, USA.
Joachim H IxDepartment of Medicine, University of California, San Diego, San Diego, California 92161, USA.
Katalin SusztakDepartment of Medicine and Genetics, University of Pennsylvania, Philadelphia, Pennsylvania 19104, USA.
Ian H de BoerDepartment of Medicine, University of Washington, Seattle, Washington 98195-6420, USA.
Bryan KestenbaumKidney Research Institute, University of Washington, Seattle, Washington 98195-6420, USA.
Adriana HungDepartment of Medicine, Vanderbilt University Medical Center, Nashville, Tennessee, USA.
Sharon M MoeClinical Translational Sciences Institute, Indiana University School of Medicine, Indianapolis, Indiana 46202, USA.
Farzana PerwadDepartment of Pediatrics, University of California, San Francisco, San Francisco, California 94143, USA.
Cassianne Robinson-CohenDepartment of Medicine, Vanderbilt University Medical Center, Nashville, Tennessee, USA.ORCID 0000-0003-4783-7046
Vanderbilt University Medical Center · USUniversity of California, Los Angeles · USUniversity of Pennsylvania · USUniversity of Washington · USIndiana Clinical and Translational Sciences Institute · USIndiana University School of MedicineUniversity of California San Diego · USUniversity of California, San Francisco · USUniversity of Pittsburgh · US

Funding

PILOT STUDY--CLINICAL NUTRITION RESEARCHP30DK035816 · NIDDK · UNIVERSITY OF WASHINGTON · PI GREGORY J MORTON · 1986 to 2026
$30.4M
UCLA clinical site for the investigation of undiagnosed disordersU01HG007703 · NHGRI · UNIVERSITY OF CALIFORNIA LOS ANGELES · PI MARTINEZ-AGOSTO, JULIAN, NELSON, STANLEY F. · 2014 to 2022
$10.1M
Genomics, GPUs, and Next Generation Computational StatisticsR01HG006139 · NHGRI · UNIVERSITY OF CALIFORNIA LOS ANGELES · PI SOBEL, ERIC · 2011 to 2023
$5.1M
Modeling, Inference, and Optimization for Genomic and Biomedical Big DataR35GM141798 · NIGMS · UNIVERSITY OF CALIFORNIA LOS ANGELES · PI LANGE, KENNETH L · 2021 to 2025
$2.7M
Hormonal Regulation of NHERF1 in BoneR01DK105811 · NIDDK · UNIVERSITY OF PITTSBURGH AT PITTSBURGH · PI FRIEDMAN, PETER A · 2016 to 2019
$2.5M
Statistical Innovation to Integrate Sequences and Phenotypes for Scalable Phylodynamic InferenceR01AI153044 · NIAID · UNIVERSITY OF CALIFORNIA LOS ANGELES · PI Marc A. Suchard · 2021 to 2026
$2.4M
Integrative approaches for mapping the genetic risk of complex traitsR01HG009120 · NHGRI · UNIVERSITY OF CALIFORNIA LOS ANGELES · PI PASANIUC, BOGDAN · 2017 to 2021
$2.3M
Investigating causality between abnormalities of mineral metabolism and kidney, cardiovascular and bone diseaseR01DK122075 · NIDDK · VANDERBILT UNIVERSITY MEDICAL CENTER · PI ROBINSON-COHEN, CASSIANNE · 2019 to 2023
$1.9M
RGS14 Regulation of Hormone-sensitive NPT2A-mediated Phosphate TransportR01GM140632 · NIGMS · EMORY UNIVERSITY · PI FRIEDMAN, PETER A, HEPLER, JOHN R · 2021 to 2024
$1.8M
Vitamin D Genetics and Racial Differences in Pediatric Chronic KidneyDisease-Mineral and Bone DisorderK23DK123378 · NIDDK · UNIVERSITY OF CALIFORNIA LOS ANGELES · PI LASTER, MARCIANA LEE · 2020 to 2024
$995k
Genetics of CKD and Hypertension-Risk Prediction and Drug Response in the MVPI01CX001897 · VA · VETERANS HEALTH ADMINISTRATION · PI Adriana Hung · 2020 to 2026
–
CSRD VA I01 CX001897NHGRI NIH HHS R01 HG006139NHGRI NIH HHS R01 HG009120NHGRI NIH HHS U01 HG007703NIAID NIH HHS R01 AI153044NIDDK NIH HHS K23 DK123378NIDDK NIH HHS P30 DK035816NIDDK NIH HHS R01 DK105811NIDDK NIH HHS R01 DK122075NIGMS NIH HHS R01 GM140632NIGMS NIH HHS R35 GM141798
6 · The paper itself

Abstract

contextChronic kidney disease (CKD) causes multiple interrelated disturbances in mineral metabolism. Genetic studies in the general population have identified common genetic variants associated with circulating phosphate, calcium, parathyroid hormone (PTH), and fibroblast growth factor 23 (FGF23).

objectiveIn this study we aimed to discover genetic variants associated with circulating mineral markers in CKD.

methodsWe conducted candidate single-nucleotide variation (SNV) analysis in 3027 participants in the multiethnic Chronic Renal Insufficiency Cohort (CRIC) to determine the associations between SNVs and circulating levels of mineral markers.

resultsSNVs adjacent to or within genes encoding the regulator of G protein-coupled signaling 14 (RGS14) and the calcium-sensing receptor (CASR) were associated with levels of mineral metabolites. The strongest associations (P < .001) were at rs4074995 (RGS14) for phosphate (0.09 mg/dL lower per minor allele) and FGF23 (8.6% lower), and at rs1801725 (CASR) for calcium (0.12 mg/dL higher). In addition, the prevalence of hyperparathyroidism differed by rs4074995 (RGS14) genotype (chi-square P < .0001). Differential inheritance by race was noted for the minor allele of RGS14. Expression quantitative loci (eQTL) analysis showed that rs4074995 was associated with lower RGS14 gene expression in glomeruli (P = 1.03 × 10-11) and tubules (P = 4.0 × 10-4).

conclusionWe evaluated genetic variants associated with mineral metabolism markers in a CKD population. Participants with CKD and the minor allele of rs4074995 (RGS14) had lower phosphorus, lower plasma FGF23, and lower prevalence of hyperparathyroidism. The minor allele of RGS14 was also associated with lower gene expression in the kidney. Further studies are needed to elucidate the effect of rs4074995 on the pathogenesis of disordered mineral metabolism in CKD.

Indexed as

CalciumRenal Insufficiency, ChronicBiomarkersFibroblast Growth FactorsHumansMineralsParathyroid HormonePhosphatesReceptors, Calcium-SensingBiomarkersCalciumFibroblast Growth FactorsMineralsParathyroid HormonePhosphatesReceptors, Calcium-Sensingchronic kidney diseaseCKD-MBDgeneticsmineral metabolism

Identifiers

PMID35587600
PMCPMC9387704
OpenAlexW4280501110

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.